SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR11277c0_g1_i3
Scaffold_id
NCBI non-redundant
(nr)		endonuclease-reverse_transcriptase_[Bombyx_mori]
Ontology
GO:0003824 F catalytic activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006310 P DNA recombination
GO:0008152 P metabolic process
GO:0009036 F type II site-specific deoxyribonuclease activity
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0032197 P transposition, RNA-mediated
GO:0032199 P reverse transcription involved in RNA-mediated transposition
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:3.00 TPM:2.94
ORF EntryO_TrvaFAMAMG12798_complete:A_TrvaFAMAMG_TR11277c0_g1_i3
Sequence
(Nucleotide)
GTTCCATTTTTGCTAGTAAATTAAAACAAAAAGTGGAGAATTTGGAGAATAAAATTGAAA
CACTGGAAAGAGAGAAAAAGAAGAATAACTTGATGATTTTTGGGATGAAGGAAAACGAAA
AATCAAACATGCAGCTCATTGAAACAGTTGTAAAGGAAATAAAACTTTCGGGATTGAAGA
TCGAAAATAACGATATCAGTCAAGCACGACGAGTGGGACGACAAACAGAAAATGGAATCG
GCAGACCAACGGTAATCACCCTAACCACACTTTGGAAACGAGCAGAAATACTAAAAAACA
AAAAGAATATCAGAAATATCTACATAACAGAAGACTTTCCAAAGGCAGTGTTGGAAATAA
GACGTTCACTTCAAGAGAAATTAAAATTGGAAAGAAGAAATGGGAACTATGCATATATAA
ATTACGACAAATTAGTAGTCAAAGAAAATAGACCCAACGATAAGAGAAAAAGATCACCCA
CGCACAGTCCAGACAACCAACATTCAAATGTCAAACCAACAACCAAAGTGAGTCGAGTAA
ATGCCTACGACTTGATGCGTCCACGACTGAACTCATCCACAACAGCCTCTACTCCCAACA
AATAGCAATCAGGAACGGAAAATCGAAACCGAAAAAAAGAAAACAAATATATGAAAAACA
CAGAAAATTATAAATGCAAAATAATCCCCAAGCCGGCTGGTCCCCGTGGGGATTTAGACC
AACCCCCTCTAGCTATACAAAAACACCAAGACAGAAAAAAAATATCAAACACTAATAAGA
ACATATACCTAACCCAATCAAAAAGGAGTAAAACTTGGAACATCGCAACACTAAATGTCT
TAACTCTAAGAACTGAAGAACGCTATTTGGAGATAGAACAAGCACTACAGAATTTTAAGT
GGGACATATTAGGAATTAGCGAGATGAGAAGATTAGGAGAAAGTATCACGGAACGCAATA
ACATAATCATCCACCATAAAGGGGAGATCCCAGGACAAGGTGGGGTAGGATTTCTGATCA
AGTCATCTCTAAAGAAAAATATTATTGACCTAGTTGGAGTAACAGACAGGATAGCCGTGC
TTCATATTAGGGTTCCAAATTACAGAAAAGAATGGGTGATAATACAAATATATGCTCCAA
CGGAACAAGCAGAACTTTCTGTTGTGGAATCCTTTTATGAGGACCTAAGAAAAACTATCT
CCAAGTACCAAGACAAACACTTAATAGTTATGGGCGACTTCAATGCTCAAATAGGAAAAA
AGGAAAATAACAATGAATTTGTCCTCGGGAAATTTGGACATGGCAAAAGAAGCAAAAACG
GTAAAAAGCTGACTGATTTCCTGATGGAGACTAACATGACTGTCCTTAATACTTGTTTTA
AGAAGAATACAAAGAAAAAATGGACATGGATTTCTCCTGGAGGAGAGTACAAAAACGAAA
TAGATTTCATCACAAGTAACTTCCGAAAAGCCTTCTCAGACACAGAAGTCGTTCATAATT
TCAATTTCAACACCAACCACCGTATGGTACGAAGCACATTAAACCTACACCCTCCCAAAC
GAAGTAGGAAAAATTTTGGAAACAACCAATCTACCAACATAAAAATAGAAAAAGAGTTAA
CAGAAGCCATAAGTACATTAGAAGATATAGATCAACAGCTAAAGATAGAGAAAAACGACC
TCGTAGAAATTTATAACAAATTCGAAAAAACCCTAACACAGCAAATTAACAACCCTAGCA
AAGAACAACCGAAACTCAACCAAGAAGTTCTAGATCTTTTAAAGGACAGGAAACAACTTT
TAACCACAAAAATACGCACAAAGGAAAATTCAAGGAAAATTGCAACAATAAGCAAACGGA
TTAACCAAGCAATTAGAAAACATCGAAGAGTCAAACGATTACAAACATTTGAAAAAATAA
TTACAAAAACAGGAGGTGTTAAAAAAGTACTTAAAGAACTAAGGAAATCCGGAGCACCAT
GGCTAACAAACATGAAGAAAAATAACAAAATTGTATCAAAAAGAAAGGATATTGAGGAAG
TAGCTACCAACTTTTATAAATCGCTATATAAAGATGAAGATAATCAAAATAAAGTAGAAT
ACAAAATAATAGAAAAGCAAAATGAAGAGCCAACCATTGAATATGATGAAGTAAGGAAAG
CAATTCTGAGCCAAAAAACCGATAAATCACCCGGTCCGGATAGAATAAATAACGAAATAT
TAAAAGGAACTTTAGAAGAAGTGTGTCCAATCCTGGTTAAAATATTTAACAAAATCCTGA
AAACAGGTATTATTCCTACTCAGTGGCAAAACTCGCATATAATATTAATTTACAAAAAAG
GAGATAGAGAAAATATTGAAAACTATAGACCAATCAGCTTGATTTCAAACATCTATAAAG
TATATGCAAAAGTTATCTTACAGCGTATTACCAACATACTAGACGAAAATCAGCCTATGG
AACAGGCAGGATTTCGAAAAGATTTCTGTACGATCATATCCATACCGTCAAACAAATTCT
CGAAAAGTATAGCGAATACGATAAAAAAGTATACATGGCGTTTATAGACTACAGCAAAGC
TTTTGACAGTTTAAAACACGAAGCAGTATGGGATAGTCTGCGAGAACAAGGCGTAAACCC
AACCTATATTAGCAGTATCCAAAACATCTATACACATAGTAAGGCAAGAATACGACTGGA
AACTTTGGGCAACGAATTTCCTATCAGCAAAGGAGTAAGACAAGGCGATCCTCTTTCTCC
AAAACTGTTTTCAGCGGTATTGGAAAGCTTATTTAGGAAACTAGACTGGGAAGAGTATGG
CTTGAACATCAACGGCATTCGGTTAAATCATCTTCGTTTTGCGGACGACCTGGTGCTGTT
CGAAGAAAACCCGCAGAAACTAGGAAAAATGGTAAATGACCTAGCATCTGTAAGCAAGAA
TGTAGGACTAGAACTTAACGAAGCGAAAACGAAGCTGATGACGAATGCTATGGAAATGGA
AATCACAGTTAGACAGCAAGCATTAGAATTCGTAAAAGACTACACATACCTAGGCCAAAT
CATTAGCTTCGAAGATCAAACTACAAAAGAAATTAACAAGAGAATCGCGACAGGATGGAA
GAAGTATTGGAGCCTGAAAGAAATAATGAAAAACAAAGATTGCAGTCTCACTATAAAAAG
AAAAACATTCGATATGTGCATACTTCCATGTCTAACATATGGATGTGAAACATGGGCTCT
AAATAAGAAACACAGAAATAGACTTCAAAGCTGTCAAAGAGCTATGGAGAGAAGTGTTAT
AGGAGTAAAGAAAAAGGAAAAAATAAATCACGAAAATATTAGAGAAAGGACAAAATTTAC
AGACATTTTAGCCAAAATAGACGAATTAAAATGGCGATGGGCAGGACATACCGTACGAAA
TAAAAAAGAGAAATGGAGCAAAATAATAACAAATTGGTACCCCAGAGACGGCAAGCGAAA
TATAGGTAGACAACACAAGAGATGGGAGGATGAAATAAAGAGAACTGCTGGACCATTCTG
GAGACGTGCCGCTCAAGATAGAAATCATTGGAAAGAGCTAGAGGAGGCCTTTGTCAACAG
ACACTCTGAAAATAGTTTTATATTAGACATTATTTAAAACTAGTGTAATTTATAATAGTA
TGTGTTAAATTTTTAAGTATTTTGTTATTTACATTGTTTTTTATTTGTAGTTGTATCTTA
TATTGTAGTTTTTCATAAAATAAAGGCTTTTTGTATTGTATTGTAATCATGAAACCAGCT
ATGAACCATCAAAGCAAGCTATATCTACCTTTAAAACAATAGAAAACGCAATAAAAACAA
TTATATCACACTTAAAACAAAAACGCCTTTGGCATAACATTACTTAGCTCGCGTACTCCT
GCCCTCAAAATAAAGTTAAAAGTTCTCACTAAATCCAAACATGGGATGTTCGATCGCATA
AGATCAGATAATTCTTAATAATATAATATTTAGAAAATAACTGTAATATGATAATATTGA
AAAAACTAACAATAGAAGACTTAGATGTAGTATACATCAATTTAGAAGGAGAAAGATATG
AAGATGAAAAAAAAATGTTTCTATTAAGAGCACTAGAATATGATCAAAATAGCACATATT
TATTTCATAATGAATTTTAAGATGCTCTTAAAGCTTTCCATCATCATTGAAGAACACTGA
ATCAATAACAGAAACCTAGATTCTAAATTATTTAGCGGTTATTGGAACGAAGTTGCTTAT
CGCGCGTTGTGAAAGGGGGCTAGACGGAAAAAATTCTTACGAAAAGTTGTCACGACACTT
TTTTGTTTTAG
(4331 bp)

- SilkBase 1999-2023 -