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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR11277c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		endonuclease-reverse_transcriptase_[Bombyx_mori]
Ontology
GO:0003824 F catalytic activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006310 P DNA recombination
GO:0008152 P metabolic process
GO:0009036 F type II site-specific deoxyribonuclease activity
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0032197 P transposition, RNA-mediated
GO:0032199 P reverse transcription involved in RNA-mediated transposition
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:0.84 TPM:0.82
ORF EntryO_TrvaFAMAMG12791_5prime_partial:A_TrvaFAMAMG_TR11277c0_g1_i1
Sequence
(Nucleotide)
GGAACAAAAACTACAACCACTGGTAGAGGAAAACAGTAAATTAAAACAAAAAGTGGAGAA
TTTGGAGAATAAAATTGAAACACTGGAAAGAGAGAAAAAGAAGAATAACTTGATGATTTT
TGGGATGAAGGAAAACGAAAAATCAAACATGCAGCTCATTGAAACAGTTGTAAAGGAAAT
AAAACTTTCGGGATTGAAGATCGAAAATAACGATATCAGTCAAGCACGACGAGTGGGACG
ACAAACAGAAAATGGAATCGGCAGACCAACGGTAATCACCCTAACCACACTTTGGAAACG
AGCAGAAATACTAAAAAACAAAAAGAATATCAGAAATATCTACATAACAGAAGACTTTCC
AAAGGCAGTGTTGGAAATAAGACGTTCACTTCAAGAGAAATTAAAATTGGAAAGAAGAAA
TGGGAACTATGCATATATAAATTACGACAAATTAGTAGTCAAAGAAAATAGACCCAACGA
TAAGAGAAAAAGATCACCCACGCACAGTCCAGACAACCAACATTCAAATGTCAAACCAAC
AACCAAAGTGAGTCGAGTAAATGCCTACGACTTGATGCGTCCACGACTGAACTCATCCAC
AACAGCCTCTACTCCCAACAAATAGCAATCAGGAACGGAAAATCGAAACCGAAAAAAAGA
AAACAAATATATGAAAAACACAGAAAATTATAAATGCAAAATAATCCCCAAGCCGGCTGG
TCCCCGTGGGGATTTAGACCAACCCCCTCTAGCTATACAAAAACACCAAGACAGAAAAAA
AATATCAAACACTAATAAGAACATATACCTAACCCAATCAAAAAGGAGTAAAACTTGGAA
CATCGCAACACTAAATGTCTTAACTCTAAGAACTGAAGAACGCTATTTGGAGATAGAACA
AGCACTACAGAATTTTAAGTGGGACATATTAGGAATTAGCGAGATGAGAAGATTAGGAGA
AAGTATCACGGAACGCAATAACATAATCATCCACCATAAAGGGGAGATCCCAGGACAAGG
TGGGGTAGGATTTCTGATCAAGTCATCTCTAAAGAAAAATATTATTGACCTAGTTGGAGT
AACAGACAGGATAGCCGTGCTTCATATTAGGGTTCCAAATTACAGAAAAGAATGGGTGAT
AATACAAATATATGCTCCAACGGAACAAGCAGAACTTTCTGTTGTGGAATCCTTTTATGA
GGACCTAAGAAAAACTATCTCCAAGTACCAAGACAAACACTTAATAGTTATGGGCGACTT
CAATGCTCAAATAGGAAAAAAGGAAAATAACAATGAATTTGTCCTCGGGAAATTTGGACA
TGGCAAAAGAAGCAAAAACGGTAAAAAGCTGACTGATTTCCTGATGGAGACTAACATGAC
TGTCCTTAATACTTGTTTTAAGAAGAATACAAAGAAAAAATGGACATGGATTTCTCCTGG
AGGAGAGTACAAAAACGAAATAGATTTCATCACAAGTAACTTCCGAAAAGCCTTCTCAGA
CACAGAAGTCGTTCATAATTTCAATTTCAACACCAACCACCGTATGGTACGAAGCACATT
AAACCTACACCCTCCCAAACGAAGTAGGAAAAATTTTGGAAACAACCAATCTACCAACAT
AAAAATAGAAAAAGAGTTAACAGAAGCCATAAGTACATTAGAAGATATAGATCAACAGCT
AAAGATAGAGAAAAACGACCTCGTAGAAATTTATAACAAATTCGAAAAAAACCCTAACAC
AGCAAATTAACAACCCTAGCAAAGAACAACCGAAACTCAACCAAGAAGTTCTAGATCTTT
TAAAGGACAGGAAACAACTTTTAACCACAAAAATACGCACAAAGGAAAATTCAAGGAAAA
TTGCAACAATAAGCAAACGGATTAACCAAGCAATTAGAAAACATCGAAGAGTCAAACGAT
TACAAACATTTGAAAAAATAATTACAAAAACAGGAGGTGTTAAAAAAGTACTTAAAGAAC
TAAGGAAATCCGGAGCACCATGGCTAACAAACATGAAGAAAAATAACAAAATTGTATCAA
AAAGAAAGGATATTGAGGAAGTAGCTACCAACTTTTATAAATCGCTATATAAAGATGAAG
ATAATCAAAATAAAGTAGAATACAAAATAATAGAAAAGCAAAATGAAGAGCCAACCATTG
AATATGATGAAGTAAGGAAAGCAATTCTGAGCCAAAAAACCGATAAATCACCCGGTCCGG
ATAGAATAAATAACGAAATATTAAAAGGAACTTTAGAAGAAGTGTGTCCAATCCTGGTTA
AAATATTTAACAAAATCCTGAAAACAGGTATTATTCCTACTCAGTGGCAAAACTCGCATA
TAATATTAATTTACAAAAAAGGAGATAGAGAAAATATTGAAAACTATAGACCAATCAGCT
TGATTTCAAACATCTATAAAGTATATGCAAAAGTTATCTTACAGCGTATTACCAACATAC
TAGACGAAAATCAGCCTATGGAACAGGCAGGATTTCGAAAAGATTTCTGTACGATCGATC
ATATCCATACCGTCAAACAAATTCTCGAAAAGTATAGCGAATACGATAAAAAAGTATACA
TGGCGTTTATAGACTACAGCAAAGCTTTTGACAGTTTAAAACACGAAGCAGTATGGGATA
GTCTGCGAGAACAAGGCGTAAACCCAACCTATATTAGCAGTATCCAAAACATCTATACAC
ATAGTAAGGCAAGAATACGACTGGAAACTTTGGGCAACGAATTTCCTATCAGCAAAGGAG
TAAGACAAGGCGATCCTCTTTCTCCAAAACTGTTTTCAGCGGTATTGGAAAGCTTATTTA
GGAAACTAGACTGGGAAGAGTATGGCTTGAACATCAACGGCATTCGGTTAAATCATCTTC
GTTTTGCGGACGACCTGGTGCTGTTCGAAGAAAACCCGCAGAAACTAGGAAAAATGGTAA
ATGACCTAGCATCTGTAAGCAAGAATGTAGGACTAGAACTTAACGAAGCGAAAACGAAGC
TGATGACGAATGCTATGGAAATGGAAATCACAGTTAGACAGCAAGCATTAGAATTCGTAA
AAGACTACACATACCTAGGCCAAATCATTAGCTTCGAAGATCAAACTACAAAAGAAATTA
ACAAGAGAATCGCGACAGGATGGAAGAAGTATTGGAGCCTGAAAGAAATAATGAAAAACA
AAGATTGCAGTCTCACTATAAAAAGAAAAACATTCGATATGTGCATACTTCCATGTCTAA
CATATGGATGTGAAACATGGGCTCTAAATAAGAAACACAGAAATAGACTTCAAAGCTGTC
AAAGAGCTATGGAGAGAAGTGTTATAGGAGTAAAGAAAAAGGAAAAAATAAATCACGAAA
ATATTAGAGAAAGGACAAAATTTACAGACATTTTAGCCAAAATAGACGAATTAAAATGGC
GATGGGCAGGACATACCGTACGAAATAAAAAAGAGAAATGGAGCAAAATAATAACAAATT
GGTACCCCAGAGACGGCAAGCGAAATATAGGTAGACAACACAAGAGATGGGAGGATGAAA
TAAAGAGAACTGCTGGACCATTCTGGAGACGTGCCGCTCAAGATAGAAATCATTGGAAAG
AGCTAGAGGAGGCCTTTGTCAACAGACACTCTGAAAATAGTTTTATATTAGACATTATTT
AAAACTAGTGTAATTTATAATAGTATGTGTTAAATTTTTAAGTATTTTGTTATTTACATT
GTTTTTTATTTGTAGTTGTATCTTATATTGTAGTTTTTCATAAAATAAAGGCTTTTTGTA
TTGTATTGTAATCATGAAACCAGCTATGAACCATCAAAGCAAGCTATATCTACCTTTAAA
ACAATAGAAAACGCAATAAAAACAATTATATCACACTTAAAACAAAAACGCCTTTGGCAT
AACATTACTTAGCTCGCGTACTCCTGCCCTCAAAATAAAGTTAAAAGTTCTCACTAAATC
CAAACATGGGATGTTCGATCGCATAAGATCAGATAATTCTTAATAATATAATATTTAGAA
AATAACTGTAATATGATAATATTGAAAAAACTAACAATAGAAGACTTAGATGTAGTATAC
ATCAATTTAGAAGGAGAAAGATATGAAGATGAAAAAAAAATGTTTCTATTAAGAGCACTA
GAATATGATCAAAATAGCACATATTTATTTCATAATGAATTTTAAGATGCTCTTAAAGCT
TTCCATCATCATTGAAGAACACTGAATCAATAACAGAAACCTAGATTCTAAATTATTTAG
CGGTTATTGGAACGAAGTTGCTTATCGCGCGTTGTGAAAGGGGGCTAGACGGAAAAAATT
CTTACGAAAAGTTGTCACGACACTTTTTTGTTTTAG
(4356 bp)

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