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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR11274c3_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_rab5_GDP/GTP_exchange_factor_[Bombyx_mori]
Ontology
GO:0001933 P negative regulation of protein phosphorylation
GO:0002686 P negative regulation of leukocyte migration
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0006612 P protein targeting to membrane
GO:0006810 P transport
GO:0006897 P endocytosis
GO:0008270 F zinc ion binding
GO:0015031 P protein transport
GO:0016567 P protein ubiquitination
GO:0017112 F guanyl-nucleotide exchange factor activity
GO:0017137 F small GTPase binding
GO:0031982 C vesicle
GO:0033004 P negative regulation of mast cell activation
GO:0043305 P negative regulation of mast cell degranulation
GO:0043547 P positive regulation of GTPase activity
GO:0046580 P negative regulation of Ras protein signal transduction
GO:0046872 F metal ion binding
GO:0048261 P negative regulation of receptor-mediated endocytosis
GO:0050728 P negative regulation of inflammatory response
GO:0055037 C recycling endosome
GO:0060368 P regulation of Fc receptor mediated stimulatory signaling pathway
GO:0061630 F ubiquitin protein ligase activity
GO:1900165 P negative regulation of interleukin-6 production
GO:1900235 P negative regulation of Kit signaling pathway
Transcript
Level		FPKM:26.67 TPM:26.13
ORF EntryO_TrvaFAMAMG12756_complete:A_TrvaFAMAMG_TR11274c3_g1_i1
Sequence
(Nucleotide)
GTTCGAATCGAATCGAATCGAATACTAATATTAGTAATATTAGTATTCGATTCGGCACGA
ATAATTCGTAAGTTAGAATTATTCGCACACCCCTATGAAATATATCTCAAAATTTGATCG
CTCCTAAAAATTAAACAGTCTCGAAATATCTCGACAGTATTTATGATTGTTATTGCTACC
CAAAATATCGCAAAGGTAAAAAAACACCTTAGGTCTTTTTGAACTTGGGTTCCAAGAGCC
TCCAATTTCGAGAAATTGTATAGTATTCGGCCTCAAAAGCACGAGTATTAAGTAGAGTCC
TATCACATATTGACGAGTCCTACGTATACTGGTATAAGTGACAAAACGTTTACACTTTGC
AACTTCGCTAGAACATATACCAATAGTAGATCCTGTCTCTGAAAATAATTGATATTTAAA
AGAAAATTTTCAACATATAAAGATTAGGTAATTTTACTACTATCTATGCAGAAAAACGGT
TTAAGTCTTTTTTTTTGTTTTACCAGTATAATTAGAACTCGTCGACATCGTTATCCCATT
CTCGATACGTTTCATATTTTGTCACTGAAAATATCACAATATCATGCCAAACCACTTGTT
TCCTTCGGGCAGATTAATTTAGACAAATTTAATGCGAGATCATATTTTTTTAGAATTTAT
TTCGAAGATTTTTCAATTTATTTTTTATTGATATTTTTTCTAACTAGGTAAGATCCAACC
ACATAGCTTTGATTTATTTTGGCTAACAATTTTATTTTATTCCATCATTGCATCACCCTG
TATACATAATAATGACAATATATACAGAAGGGTTAAAAACAAAAAAATACAATATGTAAA
GTAAAATATTTCGACGTACAAAATAAAGTTCCACATGACAATACCAATTTACAATTTTTG
ATATTGTGGTTACATTATCGCGCAAATATTCGTCACTAAAACATTGCATCTACGCGACTG
TTTAGCTTCGAATCCTTTGCCATTCTTAGTAACGAACAATAATTTCTTTTAAATCACCCC
AGTCAACCGAAAGTGTAAACTTTGATGACAAAAATTTCGGCGTAATTTATCGCGATAACA
CGAACATCGGTTAAAATAACCTTATGAACTACAGCATCGTTCGTTATTTTAGCACAAATT
CGGCGAAATTTTCCTATACAATTCACTATGTCTAATTTAGTTTGGTTTTGCCGAAGTTTG
AGGTTGCATCGGCGAAGGCAAAAGGCAAACCGCTGTTGGACTCCCGCTATCATCCAAAAT
TGACGTACTAGCTTCAACACTCTCCAAAGTAAACGGATCAGTTCTATGTATCACTTCATA
AGGGTCAGATTCCTTTGATTTCGTCATGAGACTAAATTCGTCGAACTTTTCTAGCGTTTT
GCAGGCTTCCTTTGAGGTTTGAGGCGCGCACGGGTCAAAGGACCTTAACGCGTCCGGACT
TAAGGCTTCTTTTTCAACTTTCGGGTCTTCTGCTAAGCTATTATCGGCGCTGAAATCCGA
TAAATCTATATCGTAGTTAATATTGCTGAGTCCGGGCAAATTTTCGCCGAACTCGTCTGG
AGTTAGAACTTCGTCTAGTGACCTGCAATCGAAGGGAGTGAGACCCATAGGAGATGGAGT
CAGTAGTTCCATAGAACTAGTTTGTTTTAGTTCGGGAAATTGTTCTAAATTCGGCGATTT
TGCCGGCGAATGTTTGTCTACGACTTCCAAATCTAACACGTTGAGTTTGTCTGCGTTTTC
CTCGATGACGACGCTCGGTTCTTTCAGATCGAGTTTCGGCTGGATTTGGGTCGTGTTCGG
TTCGAGTTCAAGTAGTAGGGGTTGTTCGGTATTCACATCAGGTTCAATATCTAGTTTTGG
TATTATAATAACTCCGTTTTGTTTCGTTAATCGTGGTAGTTCCCTTCTAGGTTTAATTTC
TAGAGGTGTTTTTGCTAGGACATCTTTAACTTTTTTCGCTATTTGTTCCTCGAAGGAAGT
GACATTAATGGCCATAGCTTCAGCCTCCCTCTGTATTTGTTTAGTTTGTTCCAGCAGCTT
CTTTGCTAGAGCTGTTTGTTCGTCTGCTTCACGAGACGCGCCGCAGAGGGAGAGCGCTGC
CGTCCAAGCACTGCCGCCTATGGATGCCGGCATCGCCATGTAACAATCAAACTCTTTCTT
ATCCATATTTAGTGACTCAGCCGTTAGATTCTGAATGAACGATACCGCACAACACAAGTT
GGTGAAGTAGTATCCTCCCTCGCCCGTCATCAGTCGCTGCGCGTTGCAGAACCGAGTCAC
GTAGTTGATGTTGCTGATCAGACGAGGCGGGTTCGCTTTCAGGACGGTGAGTATGAGCGC
GGGCAGCAAGTCATCGGCGGAGGCGGGAGCGGGCGCGGCGAGACGCAGCACGTGTCGCGC
GCACCGCCGCACGCGCGACAGCTTGCCGCCGGACCAGCGCGCCGCGTCCATACCGAGCAA
CTCGCTAATAGCTTTATAAAGTAGCCTCCTACACTCAGCGTTGTTTCTGTCCAGCTTACA
CTCCAGATGTTTTTCCCCCACCCAGCTGAGTTGTTGTATGCGTTCCGACATAACGCGATC
CTGGCGCTCGTCGTCCGTCCCATTCGGAGAAAACACTACTGACGGTAGCTCATGCAGATA
CGTCATGGCGTGTTTCTCTACGAAGTCCATCAGCAGTTCCCGCGTGTCCGAGTCTATCGA
CACATAGTGCTGAGATGTTTCCATGTGTTTCATGTATCTCTGATACTGTTTCTGCACCCT
CTCCGACAACTCGTCCACGTTCAACACGGCAGCACACTTGATAACGTCCATGATGAATGT
TTGTACGAAAGCCCTCGCGTCCCTGTCCACCTGCGCGGGGAATGAGGGGAACCTGGCGCG
GAAATCTGACTTCATACCCTCGAATACCATGGCGGGGATTTTGAACTCCGGCTGCCTTCT
TTCGGGGGGAGTTTCGTGTTCATCTGTGCTGTTCTTCTTAAATACATTAAACTTCAATAA
ATTAGTCTTCTTGAGCGTCTCGCTTTGTCGCAGTCTCTTCTCTTCGAACTTCGAGAAAGA
CGCGTGCGATGTCAGCTTAGGACTACGTTCCGATTTCTTCTGGTCCAGTCTGGGAAGAGT
TGCCGTGTGAGACGAGGCCTTTTCAGCTTTCCTCTGCCTCTGCATCTGTTCTCTGTGACA
TTTAGAGCAGTACCCCTGCCACTGCGGGTTGCCAAAGTAGTCGCACCCATTTTTGCACTT
CAAGTCGTTCTGATCAATCCGCAGTGAAGGCATCTTCGACGTTATCATGTATTTGTAGGA
CCTTAAAGTCCCTATTTATTTATATGATGGGAAAATTTCGTAGTTTCTAATAAAGCAGGA
TTTTCCTTCATAGTTCGACTGGCA
(3384 bp)

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