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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR11211c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_ATP-dependent_RNA_helicase_abstrakt_[Amyelois_transitella]
Ontology
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006915 P apoptotic process
GO:0007399 P nervous system development
GO:0008270 F zinc ion binding
GO:0009653 P anatomical structure morphogenesis
GO:0010501 P RNA secondary structure unwinding
GO:0016787 F hydrolase activity
GO:0030010 P establishment of cell polarity
GO:0046872 F metal ion binding
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:7.40 TPM:7.25
ORF EntryO_TrvaFAMAMG12707_5prime_partial:A_TrvaFAMAMG_TR11211c0_g1_i1
Sequence
(Nucleotide)
GGCCTTTCTAGATAGTCCAGAATACCACCAAAATATGGTCATTGTGATCAGGGTGACTAT
TAAATGCGAAAAATCAACTTAATTATGTACAAAAATTACATTTATTCATTAAAAAATACA
CTTATACTAAAATTCTTATAAATAAATTAGTAATCAGCCGCAGTGTTCGCCAAATAATCT
CTTCTACCGATGTTAGAAGCCTGTTTGTTCTGTACAGCCTCCAATTTCGGACATTCAGTG
ATCCTGTGTCCAAGCCCGGCGCAGTACGAGCAGCCGTGACCACTCGGCGCGGGCACCTCT
GCCTCACCCAACATGTCTAGCAGGAAACCAGGCACCCTCTGCCCCGCCTCCCGGAGCAGG
TGCGCCAGGTCCCGCAGCACGCTGTGGTCGGCGCGGCCCAGCAGCGTGGTGGCCACTCCC
CCACCTCCGGCTCGCCCCGTACGCCCGATGCGGTGCACGTAGTTCTCGATGTCCTCGGGC
ATGTCGTAGTTTATCACGTGCTGCACGTTTGCGAAGTCAAGACCTTTACTGGCGACATCG
GTAGCAACCAGTACATCTTTCTCTCCCTTCCTGAAGGCTTCCACTGCGCGAGACCTCTCC
TCCTGGTCCTTGCCGCCGTGGATGGCCACCGCTTCCACACCTTTAAGCAGCAAGTACTCG
TGCACAGCATCAACGTCCTGCTTCCGCTCAGCGAATATGAGCGTCGGGGGCGGAGTCTTC
TGCAGGCAGTGGAGTAGCTGCACCGTGCGCGCCTCCACCTGCGCCGGCTCCAGCTCCTGC
CGCACTGTGAGGGACGCGGCCCCCGCGCGACCCACGTTCACCGTCACTGGACGGACCAGG
GCTGACCTAGCAAAATTCTGTATCTTCTTAGGCATGGTAGCGCTGAATAACAACGTCTGT
CTCTGTCCCGCGAAGTATGAGAATATGGTCCTAACGTCCTCCTCGAAGCCCATGTCGATC
ATACGATCAGCTTCGTCCATGCATAGGTAACGACAGACGTTAAGACGGACCATTTTCTTG
TCGAGCATGTCCATGAGTCTCCCAGGAGTGGCCACCATGATGTGGACTCCTTTCTGGACT
ATCTCCATACATTCCGACACCGCCACCCCTCCAATGGCAAGACAGCTCCTAATCTCGGGA
CTCCCGGACATTTTGAGATACTTGATGAAGTGTTGAATAATGTCGTGCGTTTGCTTGGCA
AGCTCTCTTGATGGACAAATGATAAGGCCGTACGGACCTTCGTTCCTTATAAAAGGCATC
TTAGTTTCCTGTTCCAAACAGAACATGATGATGGGCAGTGTGAAGACCAGCGTCTTCCCG
GAGCCAGTGAACGCTATCCCGATCATATCTCGTCCGTTGAGGACTGCCGGCATACCCTGC
ACTTGGATGGGAGTCGGTTTCTTTATGCCTTTCGCTTCTAAGCCTCGGAGAATGCCTTTC
GGAAACTTCATATGCTGAAATGTTCTGATAGGAGGAGGTGGATCGTCTCCTTCCACTAAT
ATTCTAAGTTTATTCCGGATCATTTCATGCCGTGACTCCGGAAGGTCCAAGATACACCGA
GGTGGACGCCAGGAAGTCTTGATAGGATCTTCATATTGTATGCCTTTAGCCAACTCGGCA
ACTCCCATCAAAGCTTTACTCTGTGCCACACTTTCTAAGATGTACTCTTCCTCCTTGGCC
TGCTTCTCTGCTGCAGA
(1697 bp)

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