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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR10995c0_g2_i1
Scaffold_id
NCBI non-redundant
(nr)		nuclear_excision_repair_protein_rad23_[Bombyx_mori]
Ontology
GO:0000502 C proteasome complex
GO:0000715 P nucleotide-excision repair, DNA damage recognition
GO:0000717 P nucleotide-excision repair, DNA duplex unwinding
GO:0003684 F damaged DNA binding
GO:0003697 F single-stranded DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006289 P nucleotide-excision repair
GO:0006294 P nucleotide-excision repair, preincision complex assembly
GO:0006974 P cellular response to DNA damage stimulus
GO:0007283 P spermatogenesis
GO:0031593 F polyubiquitin modification-dependent protein binding
GO:0032434 P regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0048568 P embryonic organ development
GO:0070911 P global genome nucleotide-excision repair
GO:0071942 C XPC complex
Transcript
Level		FPKM:47.39 TPM:46.43
ORF EntryO_TrvaFAMAMG12651_complete:A_TrvaFAMAMG_TR10995c0_g2_i1
Sequence
(Nucleotide)
CGAGGTTATGTTTACTGCTTATTTTCTGTCGAGTCAGAATTTAGTTGACAAAATTAGTTC
ATAACTTCTTTAATCATTTAAAGTTTATTAAAAGTGTAAAAATGTTGGTGACACTCAAAA
CTTTACAACAACAAACTTTCCAAATTGAAATTGATCCAGAAGAAACTGTTAAAGCTTTGA
AGTTGAAAATTGAAGTAGAAAAAGGTAAAGACTTCGTCGCTGCTCATCAAAGACTTATTT
ATGCAGGAAAGATACTTTTGGATGATAATAAAATTAATTCTTATAATATAGATGAAAAAA
AATTCATTGTTATTATGGTTACGAAGCCAAAAGTTTTAGAAAGTCAACCAACCTCAACTA
TAACATCTGAAGCTGGTGAAAGCGTTTCAACCGAAAGTGGTGATGCTAAGCCTAAAACTT
CTACCGAAGAAACTGCGAAGCCCCCTGCCGCCGAACCTGAAAGAGTCGCCGAAACCCCTA
ATACTACCACTGATGCAGATCTAGAAGCTACTGTTCAAAGTATCATGGATATGGGATACG
AGAGACCTCAAGTTGAGCAAGCATTACGAGCCTCATTTAACAACAGAGAGAGAGCTGTTG
AATATTTAATAACTGGTATCCCTGACGACTTACTACATGAAGAAACAGAGGAAAGTTCTG
ATGAAGATCCATTAGCATTCCTCAGAGATCAACCCCAATTTCAACAAATGAGAGCTGTAA
TTCAACAGAACCCTAATCTTTTAAATGCAGTGTTACAGCAAATTGGACAGACAAACCCAG
CATTGTTACAAGTAATCAGTCAACACCAAGAAGCTTTTGTTAGAATGTTAAATGAACCAG
TGAATCCCTCTGCTGCTAGTGCAGCAACTGAAGAGAGTGCTGCTGATATTCAACAGCCCC
AACTAGGGTCACCAAATGTTATACAGGTGTCTGCTCAAGATAAAGAGGCTATTGAGAGAT
TAAAAGCTCTTGGTTTTCCAGAACATATGGTGATACAGGCTTATTTTGCTTGTGAAAAAA
ATGAAAATCTTGCAGCCAATTTTTTGTTGTCACAGAATTTTGATGATTAAGTTAACAAAA
CTAAACGACAAGCAGTAAAAGAAATTTAACAAGAATTAGTATATATCTTGAAACTCAAAA
ATTTTTCAGTTTTTACAAAATTGTAGAACTTGTCATTATCAATAAATTTCTTATTGTTCA
AAAAAAAAAAAAATGAAAATCTTGCAGCC
(1229 bp)

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