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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR10964c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_ATP-binding_cassette_sub-family_G_member_5_[Amyelois_transitella]
Ontology
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0006810 P transport
GO:0007584 P response to nutrient
GO:0007588 P excretion
GO:0008152 P metabolic process
GO:0010212 P response to ionizing radiation
GO:0010949 P negative regulation of intestinal phytosterol absorption
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016324 C apical plasma membrane
GO:0016887 F ATP hydrolysis activity
GO:0017127 F cholesterol transfer activity
GO:0030299 P intestinal cholesterol absorption
GO:0033344 P cholesterol efflux
GO:0042493 P response to xenobiotic stimulus
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0042632 P cholesterol homeostasis
GO:0043190 C ATP-binding cassette (ABC) transporter complex
GO:0043235 C receptor complex
GO:0045177 C apical part of cell
GO:0045796 P negative regulation of intestinal cholesterol absorption
GO:0046982 F protein heterodimerization activity
GO:0055085 P transmembrane transport
Transcript
Level		FPKM:9.78 TPM:9.58
ORF EntryO_TrvaFAMAMG12620_complete:A_TrvaFAMAMG_TR10964c0_g1_i1
Sequence
(Nucleotide)
ATTAAGTTATGTTAAGCGATGTCGTAAATAAAATATTTTCAATTACATTTTATGGCATTT
TTTAATTTTTGAAACGTCTTTTTGAAATTTGATTTGAGTTCGAAGTAGGTAGGTAGGCAA
TATTAGTTTGCTCAATAATTTCAATAATTAAATACTCAAAATATGGTAAAAAAGTATTTT
AAATTATATCCGTTTTATTAATGTTCACATATTAAAATATAACTAAAAATATTCTTACAT
AGGCACAATTCAACAAATTACTCTCTAAATTTATCCGTAATATAACTAGGCAGAGGCATC
AAATACAAAAACTTATTAAGAACCATAATACCGACAGAGAAAGCAAAAGATACACCAAGA
TTGAAGTCTAAATTGAAATCGCCAGCCAAATAAACGTCTCCTGTAAAAGTTTTCGGAGTA
AATCTTTCTGTTAAGAAGGCTTTTCCGCTGGCGTATCGGCAGTTCGCGTTAGAATTCGTG
TTTAGACTCGAGGACGTCTGGATGAGGCTTGTGATGGAGGTGCAGTTCTCGTGGTCGTTG
TAGGGGAGCACGTTGAATGAGGGTTGCTTGAATACATTCCGGTGAAGGAAGATTGAAGCA
TACCGTGTGTGTGTTACGTAGGTTAGGTAGTGTAGCCACTCTTCGAAGCCTTTGTATGAT
CTCAAAACTCCACTGGCTAGCATAACATAAATGCATGTTATGTACAGATTGACAATGGCG
GCGTTGAGACCGTTTTTTACGAACATCATGATAGCTATCGTTTGTTGTTCAGCGTAAATG
TAGCACGACCATAACACCAGTGAAAAGTAAACGTAGTCCATTGATGATATGTCTCCTAAA
ATCGGATAAATGATTGCAGCCGAACCAAATGACGTAATAAAAGAAAATGGCACAGAAACT
AAATTCCAGGAGAGAAGTAAACTGGCACCACTGTACAGCCCTTCTTGAGATTCTTCGTAA
TATCGTGTGCGGTAGGGACCATAAAGGCATATGGTGTTCATGATGCTTACAAAGTATGTG
CCCACCATCGCGTTGAAGATCAAACCGCTTTTCGTAATGAAAGCTCTTTGATAATCCTTA
GCTTCATTGTAGAATGCCCAAAGAATTAAAAAGTAAAGAGGTAAACATAACAGTCTCATA
AACATCTGTTTGAATCCGTGCTTGTTGAGGTTGAATATGGAAGCCAGGGTCCGTAAATAC
AACATCCATATAGTTCTCATACCGCCCGCTTTCCCGTAGTTCATCTGCACCTTATTAGGG
TTTACGATTCGATTGTTTTCATGAAGATTCCCTTGCATGATGGCTTGGCCTTCGATTTTG
AACTTCTCCACTAGTGCAGCGATCTGGTGATTTGATTCAATGAATCGTTCTCGCGATCGC
CTATCAACAGTTGATAGACATAAGTAATACATGAGTGGGTTTTCCAGCTGTGGGCACGGG
AACCCGATGCTTCCGAAGTAGTCGAGTAGATTCCTCGTGGGTCCGGCAAACACTACGTCA
CCAAGACACAGGTATACTACGCGGTCCAGGAACGGAAATACGTCAGATCTAGGTTTCTCC
ATAGTAAGTATAATAGCGGTTCCGTATTTTTTAGCAGCGTTCGATAATATAGATATCACC
AGGTAAGTGTTGAGAGGATCCAAATCCCACGTCGGTTCGTCCAGTAGCAATATAATAGGA
TCGCGTATTAATTGAACTCCGATGACTAATCTTCTGTATTCGCTTTTGGTTAAATTTGTC
ACGCATTTGTGCGCCACCTGAGATAGAGCCATGTCAGCCATAACTTGTTTAACTTTCGAT
GATTTTAAGTATCCTGAAACCTTAGTAAGTGATAATGACAGTGTCTGCTGAACGCTCAAA
CCGGGGAGGAGTTTAGTCGAGTGTCGGACTAAAGCGCAGTTGATATTGAACTGGTCTTCC
TCCAGCGGTACTCCTTCCAGAAGTACATGACCTTTTGAAGGCACTCGACGAGCTATAACG
TCAAGCAGTGCTCGTTTGCCGCTACCTTTCGATCCAAGTATGGCCGTGACTTCGCCGCTG
TGAGTTGTGAACGATACATCTTTAAGGATCACTCCCGTCTTCACTCCTCCTGTCAGACGT
TGAAAGAAACTGCCCGGTTCCACCTGCCCAGAATGGAACACATTGCACAACTCCAAAGTA
TAGTCACTGCCGATCATTTTGTGTTAAGAAAAATTAAATGTTTATTTAAGAAAAGTATAC
TGTTTTCATTTCAGTTTGACGCGGCCTGCTCTGCCCAGAATGGAACACATTGC
(2273 bp)

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