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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR10730c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_exosome_complex_exonuclease_RRP44_isoform_X1_[Amyelois_transitella]
Ontology
GO:0000175 F 3'-5'-exoribonuclease activity
GO:0000176 C nuclear exosome (RNase complex)
GO:0000177 C cytoplasmic exosome (RNase complex)
GO:0000178 C exosome (RNase complex)
GO:0003723 F RNA binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004527 F exonuclease activity
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006364 P rRNA processing
GO:0006402 P mRNA catabolic process
GO:0016020 C membrane
GO:0016075 P rRNA catabolic process
GO:0016787 F hydrolase activity
GO:0043547 P positive regulation of GTPase activity
GO:0071034 P CUT catabolic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090503 P RNA phosphodiester bond hydrolysis, exonucleolytic
Transcript
Level		FPKM:5.13 TPM:5.02
ORF EntryO_TrvaFAMAMG12039_complete:A_TrvaFAMAMG_TR10730c0_g1_i1
Sequence
(Nucleotide)
GTTCTTCGCTAATATTTTATGTTTTACCTATATTTTACTGTTAGTTGACAAAATTGGAAT
TGCTCGATTTTATTTTTCGGAGAATCGAAATTTAATTGTTTTTCGGCCACTTTCGTCATT
CGGCTGGATCGGGCATCTCTAAATCACAAAATTGAAAATAGGAAATATCAAAAGTTTATG
TTAGTGAATATTTTTGGTAATGTGTAATTTATTTAACACGTATCTGTAATTTTACGTTGA
ATATTACTTTATTCAGAAAAAGACAGTTCTTCTGTTGTTTAAAATGTGGACAACGAAGAC
TTTTCTGACTAAAACTAAGCGTGGAAACATCTTAAAGATTGTCCGAGAACATTATCTACG
TGATGATTTACTCTGTGGATCAGCGGCGTGTAACACATGTCCACACAAGGATGATGAACT
AGTCTTAGAATCTAGTCCTGAAACTCCTTGTGCCTTATTTGACTATCCTCACTACTTGCT
ACTGGATACCAATGTTGTGTTACACCAAATAGATGTCTTAGAGGAAGATGCTTTAAAAAA
TGTTATAATTTTGCAAACTGTGCTTGAAGAAGTTAAACATCGAAATACTGCAGTTTTCCA
GAGACTCTTGGATATAATATCTAACAAGAAAAGAAGGTTTTACTCATTTGTTAATGAACA
TCACCAGGACACTTACATAGAACGGTCACCTGGTGAGAAACAAAATGACAGGAACGACAG
AGCGATACGTAAAGCAGCATCCTGGTATGAGTATCATCTCAGTGCTAACAATGTTAATGG
AAAATACCCAAAAGTTATATTGGTGACTGATGATGAAAACAACAGAAAACTTGCTCAAGA
AGATGGAATTGTCTGCTGCTCAATTAAAGATTACGTTGAAAATATATCTGGTTTTGTTGG
ATTGGTTGACAAATTATCAAAGAATGTGATCCCTGAGAGTTGTTCCAAGGATGCGTTATA
TCCGGCACATCTCACTCCTTCACAAATACATGAAGGTATTCGTGGTGGGAAATTATATCA
GGGCACCTTTCATGCCTCTAGGGATAATTTCTTGGAAGGATCAGCTGTTGTCAATGGATT
TGAAAAATCGATCTTACTTCAAGGTCACAACGGTATAAATCGTGCTATAGATGGTGACAT
AGTTGCTATAGAGATATTCCCAAAAGAAGAATGGCGTAAGCCAAGTGACATCGTTTTGGA
AGATAAAGCTGAGGATCCAGGAGATTTTCTTGAAGAAGAATCAATTTTACTCAATGCTGC
AAAACCAACTGTTAATGATGATGAAATAACTCCCACTGGGAAGGTAGTAGGCATTATAAG
GAGGAAATGGAGACAGTACTGTGGGATATTAATGCCTAGTAAATTTCCTGGTGCCACACG
TCATATCTTCACCCCGGCGGAGAAGAGAATCCCTCGAGTTCGAATAGAGACTCGTCAGAG
TGAAGCGCTCGCGGCCCAACGCATACTGGTAGCACTCGACTCCTGGCCGAGGAATAGCCG
GTATCCCCTCGGACATCTGGTTCGAGCGCTTGGACCTATTGGTGACAAAGATGCTGAAAA
CGAAGTCATATTGCTGGAACACGATGTTCCACACGCAAGGTTCAGTGAAGCTGTGCTGAA
CTGTCTACCGCCCAAAGATTGGACTATACCAGACGAGGAAAGAAAGAAACGCGTAGATCT
CCGCGACATCTGCATATGTTCAGTGGACCCGCCCGGCTGCACCGACATCGACGACGCCCT
GCACGCGCGCGCGCTCCCCGCCGGACGCCGCGGGTACGAGGTGGGCGTGCACATCGCTGA
CGTCACGCACTTCGTCAAACCGAACACGCCGCTCGACAAGGAAGCCGCCTCCAGGTCCAC
TACGGTGTATCTCGTCGATAGAAGGATCGATATGGTGCCTGATTTATTAAGTTCAAACCT
GTGTTCTCTGCGTGGTGGTGAAGAAAGGCTAGCTTTTTCCTGTGTATGGGAAGTGGATGA
AAATGCTAACGTTTTATCTACAAAATTTCACAAAAGTGTTATAAAGTCAAGAGCAGCGAT
GACGTACGAAGAGGCGCAGATCGCGATCGACGATTCAAGTCGTAACGATGAGATCGCGAC
GTCGCTGCGAGTACTCAACGCGCTCGCTAAGAAACTTAAGAAGAAGAGGCTGGATAACGG
AGCTTTGTTACTGGCCTCGCCTGAGATACGGTTTCAGGTTGACTCAGAAACCCACGATCC
AATAGAAGTGCAAGCCAAGAAGATAGTGGACACGAACTCGATGGTGGAAGAGTTCATGTT
GTTAGCGAACATCAGCGTCGCCGAGAAGATCCTGGAGGAGTTCCCGCAGTGCGCCATGCT
GCGCCGACACCCCGCGCCGCCGCCCGCTAACTTCGACACATTCCTCAAAGCTGCTCGGCA
ACAGGGTTTCGAAATCGACGTATCAACAAACAAATCTTTTTCTAAATCGTTGAACGAGGC
CGTGATACCGGAGCGACCGTACTTCAACACGCTGCTGCGTATAATGGCGACGCGCTGCAT
GCAACAGGCCGTGTACTTCGTCAGCGGGACTGAAGCCGCGGACGAATATCACCACTACGG
ATTGGCTTGTCCCATTTATACACACTTTACTTCACCTATTAGAAGGTATGCTGATGTCAT
AGTACACCGTCTACTAGCGGCGTGCACTGCACAAGGCGACACCCACGCCGCGTTACTGGA
TGCAAGGAGCGCCGCCTCCATCGCGGACAACCTCAACTACAGGCATCGACACGCGCAGCA
CGCGGGCCGGGCCTCTGTCGCACTCAACACGCACATCTTGTTCAAGAACAGAGTTGAGAT
CGAGTCTGCTGTTGTATTAGCAGTAAAGCGGAACGCATTGCAAGTATTGATACCTAAATA
TGGACTAGAGGGACCATTATATTTACCAGCTGAAAAATTCTCCTACAATGAAGAGGAACA
CATTCAGACTTGCGGCAATGTTGTTCTGAAGACATTCGACGAATTGACTGTTCGTCTCAG
TTTAGACAGTACAAACCTACAACACAGGAAACTTGTGTTCGAACTTGTTGAACCACACAT
ACCTGGGTTCAGTTACGTGCAAGACGCTGACAAAATGGACATAGAAGTTTCAGATAAAGT
TAAAGAAATTTCTAAAACTGAAAAGAAAAGGGATACTTCACCGTCTACTCCGAAATTGAG
TAAAAAGAAGAAATCAAAGAGGAAATGAGGTGTGAAATAAATATGTCTATTTTAAAAAAA
AAA
(3243 bp)

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