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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR10726c0_g3_i1
Scaffold_id
NCBI non-redundant
(nr)		hypothetical_protein_KGM_05660_[Danaus_plexippus]
Ontology
GO:0003279 P cardiac septum development
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005765 C lysosomal membrane
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0005905 C clathrin-coated pit
GO:0005925 C focal adhesion
GO:0006897 P endocytosis
GO:0006898 P receptor-mediated endocytosis
GO:0007275 P multicellular organism development
GO:0008203 P cholesterol metabolic process
GO:0010875 P positive regulation of cholesterol efflux
GO:0014912 P negative regulation of smooth muscle cell migration
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030178 P negative regulation of Wnt signaling pathway
GO:0032370 P positive regulation of lipid transport
GO:0032374 P regulation of cholesterol transport
GO:0032403 F protein-containing complex binding
GO:0032429 P regulation of phospholipase A2 activity
GO:0032956 P regulation of actin cytoskeleton organization
GO:0034185 F apolipoprotein binding
GO:0035909 P aorta morphogenesis
GO:0043235 C receptor complex
GO:0043277 P apoptotic cell clearance
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0060976 P coronary vasculature development
GO:0097242 P amyloid-beta clearance
GO:2000587 P negative regulation of platelet-derived growth factor receptor-beta signaling pathway
Transcript
Level		FPKM:7.95 TPM:7.79
ORF EntryO_TrvaFAMAMG12008_5prime_partial:A_TrvaFAMAMG_TR10726c0_g3_i1
Sequence
(Nucleotide)
GTGAGAATGTAGCTTTTATGGGTGATATGCACTAATGAGGCTGATTGTACGTCGTTAAAA
TTACACTTTTAAACTAAACTAGGAAAAAGTAATTTAAATGCACTGAAATTATATGAAATC
CTTATATATTTTTAACTGTTTTACTTTTTTGAAATATTTTATTGCTAAGGAACACTTCGA
TCAAATTTAACTAGAACACCAAAATTAAAAAAGTATTTTCAGCTGCCGGCACTTTCTATA
CAACAAATTGTTCCTGATTGAAAAATTGTTTTTTTAATACACACAATACAGTATTCATTT
TAAAGTTTTATGTAATTGTCAAGAGTTTCATTTTCGGAGACAAAATTCCAATTTTTTTAT
CTGATTAGGAATTGTTTATCTGAATATATTTGATCGAAGAACGAACAATTTTTTTAAGCG
ACAATTTGAGATTAGCTGCACAGAGATCACTTTCAGTTACTTTTATGATAAAAACTGACA
CAACCACTTAAACATAAATTCATTAAAAATAACTTAAATTTAATACGATTATTTCACAAG
GAGATTCGTCACAAATTAAATCTATTTTATTTGATAGTTATCTATTTATAATATTTTGCG
TGGATTATTTAAATCGGTAAGTGAAACTTTTTTACGTCATGTCACGAATACACTCAGGCA
GGGTTGTCAACTTAGGATATTTAGTCCCTAAATTTCGGATTCTTGGGGCTATCTGGGGTT
CTCTGTGTATTTTTGAAACATAATTAAGTGTGAGTCTATGATGATTTAAAAAAGTTTCAC
TCACGTTGTCTATGAACTAAATTGTGTGTACATCTATGTTTTGTATAATGTTTTGGCACA
ATACTATTAGTTGTGAGTTACAGTAGCGCCACCCTCTCGGCGGGGGGCGGACTGTCAGCT
GTTGATAGTAAGTTAGCTTGCTCCTCAGTAGGGTTCTGTTGTGGTGAGTACACGCTCTCG
TACACTGGATTAGCGAAGTGTTTACCACCATTCGTGTGTGTGTGCGTGACGTCATGCTCG
TCCTCTCCGGCGAGGTACATCGGGTTGTTAATCTCCACGTTGTCCGACAGGCGAGCGTGA
ACAAACGCACCATGTCTCCGTCTATGTAAGAAGAATAACGCAGCGAACACGGCCGCAGCC
AACGTCACAAGCGCCAGTATCGCTCCCGCCCACGCGCCCGCTCCCGCCCCCGCGCTCTCC
ACCGCTCCCGCTGCCGCTTGTGATGTACATTGTTTACCCACAGGACACACGCAAGACGCT
GTACCTACTTCTGATGGACTCGTATCAGGTCCCCACACACAAACAGCGGGCAGCTGACAC
TTGTCGTGGCAGACCGCGTCGTGCCCGACGTACACGGAGCAGTGGTGTCCGCCCCAGGGG
CCGGCGCACACACACACGTCGCCCGAGGGCACGCGCACACACGCACCGCCGTGACCGCAC
GCGCCGCCGCCGCATAATAACGGCTCTGTATCAGTGTGTGCATGTTGACATCGTCCATGT
GTGCAGTCCTGTGTGTCGCACCGCGCGCCACCCCACCCCCCTGGACACACGCACCGCACC
CCGCCCCCGCCCTGTGACGTCACACACGTGCCCTGATTAAGACAGTAATTATGACACTGG
TCCGTGTTATTACAGGCGGGTCCGACGCACTCCTCGCAGTGCGGTCCGCGGTAGTGCGGA
GTGCACGCACACAGCGGCATGTGGCGCACAGTGCGACACGAGCCACCATGCTCGCACCGC
CACTCCGCGCACGAGGGTGCCGCGGGGGACGCCGGCGGGACGGGGGACTCGCACCGCGCG
CCAGTGTAACCAGACATGCAGATACACTTAAGCGGCGGCAACACAGTAGTATTATCAGCA
TCCTCGACAGCATTGTGCGCATCGTCCAGCATGCACCGGCCGCGCATGTGACAATACTGT
GCACAGCGGTAGTGTTGACAGCGAGCGCCCCCGTACAGCGGCGGACACCGACACTGCGCG
CCCCCCGGCCCCCGCTCGCAGCGACCCACCCCGCACTGCAGGGGACAGGAGGGGTCGCGC
GGGGTCGTGCTCACCTCACCCGATTGGAGCACGCATTCGCTGCGACCCTGTGTCTCTCGT
AGGATGAGTCCGTCGGGACACAGACACCGGTAAGGGGGCGTGTCCCGCGCAGCACGCACG
CACAGAGCGCTCGCGTCGCACGCACCCACACATGGATCTACACTGTGTGTGAACATGGCG
GGGTGCATTACTGTGAGCGCGGTGGGCGTGCGGGGCGCGGGGAGTGCGCGGGGCAGGGCG
GCGGGGCGCGGGGCGGGCGCTCGGCGGCGGACACGTGACACGCCACGTGACGAGCCGCAC
CACAGCCATTCCTCCCACGCGCGCATGCGCACACACGCGCCGCTCCACATAGCGCGCACA
CCTGACATCGTCGACGAGTTGCGAGGTAACAACTCTCCATCAACATAAACATGAGGTGCA
ACCGGCGCTCCATTTTGCCGATGCTTGAACTCAGCCACCAGCGTTCGTCCTGTTCCATCA
GTGCTGACGGTCTCCAAGGTGCCGTAGAAGGCGTCCACGAAGTACAGGCGCGCGCTCTCG
TCGTGCAGAGCGAGGGCTGTGACGCGACGCGCACGATGCTCGACGAGGCGGGTCACGTGG
CCGGCGCCGGGGTCCGTCCGGTAGATGCCAGGGGAGGAACCACGGTCGCTCCAGTAGATG
AATCTGGTCAGATTCGAGAAGACGATGTCATCAGGTTCTGCTCCCAGCCTCGAGTAGATA
GTGACCCGCCTCCTACCGTCCAGCGCGGACACTCTGACCACCCCCTCGCCCCCCGCACTG
CCCGCACCCCCTCTCACTCCCGCCACCGTCCAGTACACGCGCAGAGATACCCAATCCACT
GTCACGCCACGTATTGAACCTTCTTCGTGTAGGAGTGTCTCTCTCTGCGTGTGTGTGTTT
GTCTTGTCCCTCATCAGTAGCGTGATGTTGCTGCGAACCAGCGCGCCCCCCTCCTCGCCC
CACCACGCCCACCACGTGCCGTTGATCAACGCACTCGTTATACACGTAATCTGCGCAGTG
TAGTTATGTGTGGGTGTGTTTGTGCGTGTGTGCGTGTCCTTTCGTGGCTCCCACACATGT
AAAGTGCCACCCTCAGACAACAACACTGTCGGCTTCTCACCGCTGACGATTTCACAAGTG
TGAGTCCCGTCCGAGAGTTGGCGCTGTTTGTAGCCCGAAACGCATTTGCACGTGTGGTTG
TTGTGTTTGGGCACACAGAGTTGCGAGCACGTATCCCACTTACACGACTTGTTCACATCG
GTATTTCCGCAAGGTTCTAGTCCAGGAACACACTCTCTATCCTGTTCTCTCAAACTCTTC
CCTGCACACGTGTAGTTGTTCTCGTCGTCACCGGCGGCACAGTCTCTGTACCCGTCACAC
AACAACGAGCCCGGTATACATGTGTGGTCGTTGCAACGGAACATATCAGGATGGCAGGCA
GCAGCGGCGCACACGTGAGGGTCCTCATCGGTCCCCACGAGCGCCCCCACGGTCCCCGCG
TGGCTCCCCGCCGATCCGGGACAGTCCGTGCGTCCGTCACAGCGCCAGGCGGGGGGCGCG
CACCGCACGCCGCACGACACGCGCGCGCCGCACGACGTCAAAACACGTGCACTGCACGAT
GCCTCGTCCGACCCGTCCGCGCAGTCCCACGACCCGTCACACCACCACTCTTTGAGTACG
CATTGTTTGTTGTCAGCACATGTCCTGGCGGCGGCCCCGCAGTGTCCGTTGCAGTCGGTC
TCGTCTGAGCGGTCGGCGCAGTGCGTCACGCCGTCGCACCGCAGCGCACTCGGTACGCAC
TCGCCCGTCCCGCAGCGCGCCTCGGACTCGGAGCAGCGTCGCGGCGCACAGCCCTGCTCG
TCACTCGCGTCGGCGCAGTCGTCCTCGCCGTCGCAGCGCCAGCGGCCCGGTACGCAGCGA
CCCGAGCCGCAGCGGAAGTAGGTGGGGTCGCAGCGCGGCGGCGGCGGACATCCCTGCTCG
TCCTCGCGGCCCGGGCAGTCGGGCTCGCCGTCGCAGCGCCAGGCGCGCGGC
(4071 bp)

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