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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR10719c0_g2_i2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_immunoglobulin_superfamily_DCC_subclass_member_3-like_isoform_X1_[Bombyx_mori]
Ontology
GO:0001656 P metanephros development
GO:0001657 P ureteric bud development
GO:0001822 P kidney development
GO:0005515 F protein binding
GO:0006935 P chemotaxis
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007411 P axon guidance
GO:0007417 P central nervous system development
GO:0007420 P brain development
GO:0008046 F axon guidance receptor activity
GO:0009986 C cell surface
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016199 P axon midline choice point recognition
GO:0021891 P olfactory bulb interneuron development
GO:0030154 P cell differentiation
GO:0030673 C axolemma
GO:0031290 P retinal ganglion cell axon guidance
GO:0032870 P cellular response to hormone stimulus
GO:0035385 P Roundabout signaling pathway
GO:0042802 F identical protein binding
GO:0050772 P positive regulation of axonogenesis
GO:0050925 P negative regulation of negative chemotaxis
GO:0051964 P negative regulation of synapse assembly
GO:0061364 P apoptotic process involved in luteolysis
GO:0070062 C extracellular exosome
Transcript
Level		FPKM:0.86 TPM:0.84
ORF EntryO_TrvaFAMAMG11964_3prime_partial:A_TrvaFAMAMG_TR10719c0_g2_i2
Sequence
(Nucleotide)
GCCTATTATATTAAAATTTTAAACTACATAATTGTATCTATAAATATTCTTACAAAGCCC
AAAGTCGTGCACCGCGAATAAAAGAGCACCCAGCGGATACTATAGTTGGCAGAAGTGACC
CTGCCACCTTACGATGTGTTTCTGAAGGGAAGCCTAAACCTACAATACAGTGGTATAAAG
ATGGTATACCTATCACATCTGCTGACCACCCGCAGCGAGTGTTACTTGAAGATGGATTGT
TATTTCTCAGGGTTATGCGAGGTAAGAAGGAAAGCGACGAGGGTGTCTACTGGTGCGTCG
CACGCAACCCCGTCGGGGAAGCAGTTAGCAGAAACGCCACACTCACTATTGCCGTTCTCA
GAGACGACTTTAGAGTTGAACCACATGACCTGAAAGTGGCTAGTGGGGAACCTGCTATAT
TGCAATGTTCATCACCAAAAGGAGTTCCTGATCCATCAGTACATTGGACTAAAGATGGAC
ACGGATTAGATGTAGAAATTAATGGAAGAATATCAGTGGTCGAGGGAGGAGATTTAAAAA
TACTGGAAAGCATTCCGTCAGACAGCGGTGTATATAGATGTATAGCTTCTAACGTGGCAG
GCGAAAGGCAATCCCGTCCTGCTACGCTTCTCGTCTTACGTAGACCGCATTTTCTAGTGA
AACCCAATAACATAACGGCTTTAATAGGGCAGAACATTGAGTTTCATTGTCAGGCATCCC
CAGAATCAGATGTATCGGTAAGTTGGGCCCGAGACAGGGGTACGTTGTCTCCGTACGCGA
TAATTCGCAGAGGTTCGCTAAGAATAGATCGTGTTGCCGCCACCGATGCAGGGGCATACA
CTTGCCAAGCTGAAAGTCAAGCCGGTTCGAGTTCCGCTAGCGCATCTTTGACAGTTAATT
CTTTACCTCATTTCACACGTGTACCTTCGGATACAACAGCATGGGAAGGAGAAGCAGTGT
CATTTCCATGCGAAGCGGAAGGTTCTCCAAAACCAGTTGTTTTTTGGACTATGGAAGGAT
CTCAAGAATTAGTTTTTACGAAATCAACACACAGCACTGGATACCTATATTTGGATCGAG
TTACAATAAGGCACGCTGGAAGACTGACTTGTGTTGCTGTTAATTCTGCAGGGAGCATTT
TACATACTGTCACTTTACAGGTTTTAAGGAGAGAAGCTAATTCATTTAAAGATGACTTAG
AATTATCGTCTCCTTATCCAGAGTTAAGTAAACCCCTAAATTATCCACCGATGACTCAAT
ATGAATTAGTGCAGGCTCGACGTTATTTGCAACAGGATGTTTTGTCTTTAAAGCGAGTAG
AAGGAATTTCTGCCACGACTTTGAAAATTGTTTGGGATGTGATGACAGATTATAATGAAT
ATTTGGAGGGTGTAAAAATTTGGTTCAATGGCACTTCATTGAATACTGGAAGTGCCTTTG
AATTAACTCTCCATTCCAATGAATCGAATGAAAGTATGAAGGAATGGAGAAAACATGAAA
ATTTCACTATGACCACGGTACATAATAGTGGCTCTTCTAGTCATGTTCTAACAGGTTTAA
TACCTTTTGCTCAATACGACGTGTTTTTGATGCCATTTTACAAATTGTTGTTAGGAAAGC
CTTCCAACATGCGATCCGGTTTCACAGAAGAAGATGTGCCGTCGGAACCTCCTTTGAGTG
TTACAGCGGGAGTGATAAATGCGACATCGGCTTGGATAAGATGGGAACCGCCTCCTGTTT
ACGCATGGAACGGCGAAATATCCGGATATCTGATCGAAGTTCGTATTGGTGGATCTACTG
GAGGCAGAGTTGTAGGGCAAATGTCTTTAGGTCCCAAAACTAGAGCAGCTGCAGCGAGTT
CTTTGCGAGCTGGAGGTCGGTACAGTGCAAGAGCTGCAGCCGTAACTAAACGAGGTCATG
GACCTTTCAGTCCACCTGCACATTTTCATATGGTTCCTACACAAACCCAGAGACACTATG
TGCAAACGGAACCAGCAACAGACAAGGCAATAATATTAATGTTCCAAGAAACTTGGCTTT
TAGCACTTTGTGCGACTTTGTTAGTGTTGATATTTGTCGGCGTCGGTGTAATAGTTTACT
TTAAGAAACGACATTGCAAACAACAAAAGAATCAGAACTCAACTGGAACAACTATAGCTA
ATGCACAACAATGTCTTCTAAGGAAAGAAGCCGTTTGGTTAAGGGAGAGGCCCGTTTTTG
AAGGGTCAACAGAACCACGGATCGAAATATTAAATTGTCATCAGACTCTTCTGCAGGGTC
ATTCTATAGGCACAATGGCTACAGAGGTCGAATACAGTCTTCCACAACATTCAAACACAA
TAAATCCAATGTGCGAAGAAGAACAGCGAAGACTCCAACCAGAACCTTACGCGTCTAGTG
CCATTTATACTGAACTTAACTATCAGGATAACACCGATATAGAAGACTCCTGTATGAAAT
GCGCCATAAGCCCTGGTTCCTACGACAACAGCATGATTAGGTCTTATGGAGATAGTAATC
AATATTCAAATGAAGAATGTTCAACATGC
(2549 bp)

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