SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR10718c5_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_DENN_domain-containing_protein_5B_isoform_X3_[Bombyx_mori]
Ontology
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005262 F calcium channel activity
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005829 C cytosol
GO:0017112 F guanyl-nucleotide exchange factor activity
GO:0017137 F small GTPase binding
GO:0030904 C retromer complex
GO:0042147 P retrograde transport, endosome to Golgi
GO:0043547 P positive regulation of GTPase activity
GO:0050982 P detection of mechanical stimulus
GO:0070588 P calcium ion transmembrane transport
Transcript
Level		FPKM:3.97 TPM:3.89
ORF EntryO_TrvaFAMAMG11949_internal:A_TrvaFAMAMG_TR10718c5_g1_i1
Sequence
(Nucleotide)
GCGGCGTCGCGGCGGGCGGCGCGGGCGAGCGCGGTGTGTGTTCGCTGCGGACGCGGGCCG
CCACCAGCAGCCGCTCCGTGGAACCGTCGTCCACGCCGCTGCCCAGCCAGCGGTTACACG
GAAAAGTGTAGGTATGTCCTGTCACTTCGTTTCTCACATAGACTTGATCAAGTAACCATC
TTGGCGACAATCCAGAATTATCGTGACCGATCCTTAAAGTTGATAATATACCGAGATTCT
TGTGATGAAAAACAAATTCGTTTGTGTTACGAGGTATGGGAATCTTTGGCGTCGACTCTC
CGTTCATACCAGAGATTGAAATCCAGCAGTTGGCGGTCGTTTGACTAGCTTTGCGAGACG
GCATTATTAACACGCGATATGGAAGTTTTGTTGTAGGATAGGTATTAGTAAAGCAATAGT
AATCGACTGCATTCAGAGTCAGTAGATGATACAAGAACTGTT
(462 bp)

- SilkBase 1999-2023 -