SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR10712c5_g2_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_mothers_against_decapentaplegic_homolog_4_isoform_X1_[Bombyx_mori]
Ontology
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005667 C transcription regulator complex
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007179 P transforming growth factor beta receptor signaling pathway
GO:0031005 F filamin binding
GO:0043234 C protein-containing complex
GO:0046332 F SMAD binding
GO:0046872 F metal ion binding
Transcript
Level		FPKM:2.43 TPM:2.38
ORF EntryO_TrvaFAMAMG11841_5prime_partial:A_TrvaFAMAMG_TR10712c5_g2_i1
Sequence
(Nucleotide)
CCTCAAATGGGACCCGGTACGCCGCAGATGGGTCCGGGCACGCCTCAAATGGGACCCGGT
ACGCCGCAGATGGGTCCGGGCACGCCTCAAATGGGACCCGGTACGCCTCAGATGGGCCCT
GGTACGCCTCAGATGGGCTCGAACGTACCACAGATGGCATCACCGAGAATGGCGTCGGCT
CCCACGCAGATGTCCCCCGGAACGCCCCAGATGCCGTCGATCAGCCAGGGGATGTCCATC
CCGAGCCCGCAGCAGATGGCGATGGTGCAACAGAGAGCCATAGCGCCGAAACTGGAGCCC
CCCGACACGATGGACGCCCGAGCCATGTGGCTGCCAAAACGAATGAACCATTCTGGTACC
GTATCTCCGATAACGGAAGCTCCCCAGCAGAACGGTTTCGCAGCCACCAGTCCAGCCCCT
CAGCCAAGTCCTCTGCAGCATCAGAACCAACCGCAGCCGGCTCCACAACAACAGCAACAA
CAAGGAACATGGACGGGTAACAACACGTTGACGTACACGCAGAGTCTGGCCCCGCCCCCC
GCCGCGCCCTCCGTGCCGTTGGACGCGCCCGCACACCATCATCATTACTTCAACGGAAAC
CCTGGTGGTTTACTATCGAGTCAGCCCGCTCCGGAGTACTGGTGCTCTGTTGCCTACTTC
GAACTGGATACGCAAGTCGGAGAAACATTTAAAGTACCTTCCAGCAGACCTAACGTTACT
GTTGACGGTTACGTTGATCCATCAGGCGGTAACAGGTTCTGTTTGGGAGCCCTCAGTAAT
GTTCACAGAACAGAACAAAGTGAAAGAGCGAGACTGCACATAGGCAAAGGCGTGCAACTA
GACCTGCGCGGCGAAGGCGACGTGTGGCTGAGATGTCTGTCGGACCACTCCGTGTTCGTG
CAGTCGTACTACCTGGACCGCGAGGCGGGGCGCGCGCCCGGGGACGCCGTGCACAAGATA
TACCCCTCCGCTTGTATCAAGGTGTTCGATTTGCGTCAGTGTCACCGTCAGATGCAGTCG
CAGGCCGCCACAGCGCAGGCCGCCGCCGCCGCGCAGGCCGCCGCCGTGGCCGGACACATA
CAGCCGCAGCACCCCACCATGAACAAGTGTTTAACAGCGGCAGCGGGTATAGGAGTGGAT
GATTTACGACGTCTCTGCATCGTGAGGCTTTCATTCGTGAAGGGATGGGGACCGGACTAC
CCGCGGACGTCTATTAAGGAAACGCCTTGCTGGGTCGAGGTGCATTTACACAGAGCACTC
CAACTCCTGGACGAGGTGCTCCACACGATGCCAATCGACGGTCCGCGGTCCACCATCGAG
TAGGAGTTGATCGGCTTCTTTTGAGGCCTTCGAGCGACGTCGCGCCACGCGTGACACACG
TGCAAGTTTGTTTCGGACGACTATGTGTCGCGTGTGACAGTTATAGTGAAGTGACAGTGA
ATGTGATAGTGTTACGGTTTTAGTTTGATGAATAGGCATGACGACAGTATTAATCGAAGA
TTTAATGATAGGGGAAACTGTATGTAAAAATATTGATTTGATTTTACTTAAAAAATTGAG
ATTAATAAGATTTTTAATATATAAAAATATCTCAATCAGCAATTGTAGCTGTCAACGTGC
TTCCTTTTCTGATTGCGCGATGACACTTAAAGTTTGTTTACCTAAGTGTGACGTCAAACA
CGACGCCATGACACCGGGCTGTTTCTTTGGATTATTACCGAAATAGAGGTTTTTTCATGA
ATAACAAACGTTGAAATTCTTTCGTCATGCCTATTGAAGAGTAAGGTTTCTTTGTGAGTT
TTTTGGTAAGGATTTGTCTGCGGTTTTCAGTTACAATAAACTGTCAGTTTGACTATAAAA
TGCACTATAAAAATATATATAACATGCAATATTATTTACAGTTCAATAAGTACAATCAGT
CTCATAAGTGCATATCAACCAAAAAAGCGATAATGCAATGGCATAAGTGATTTGTGAATG
TTTGTTAGTGAAAGGTAATAAGTGCAACTTGCGCTCATGAGATACGGTTTTG
(2032 bp)

- SilkBase 1999-2023 -