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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR10702c1_g2_i3
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_semaphorin-1A_isoform_X5_[Bombyx_mori]
Ontology
GO:0001755 P neural crest cell migration
GO:0001964 P startle response
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007411 P axon guidance
GO:0007416 P synapse assembly
GO:0008039 P synaptic target recognition
GO:0008045 P motor neuron axon guidance
GO:0008201 F heparin binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016199 P axon midline choice point recognition
GO:0030154 P cell differentiation
GO:0030215 F semaphorin receptor binding
GO:0030335 P positive regulation of cell migration
GO:0031987 P locomotion involved in locomotory behavior
GO:0045499 F chemorepellent activity
GO:0045792 P negative regulation of cell size
GO:0048813 P dendrite morphogenesis
GO:0048843 P negative regulation of axon extension involved in axon guidance
GO:0048854 P brain morphogenesis
GO:0050919 P negative chemotaxis
GO:2000305 P semaphorin-plexin signaling pathway involved in regulation of photoreceptor cell axon guidance
Transcript
Level		FPKM:1.39 TPM:1.36
ORF EntryO_TrvaFAMAMG11759_complete:A_TrvaFAMAMG_TR10702c1_g2_i3
Sequence
(Nucleotide)
AAAGATATAAGGTTTTGTTAACTATTTAATATATCTCTAAACAATCTACAATTTGTTACA
TCATTTCTTATCATATCAATCGAGAATATTGATTCGCTCTTAAAAAAATACACCTTTGTC
ACACGAGGAATTGTCCGTGGAATAGTGCATCGTGTGTTTCGGAAGAATAACGTCACTTCA
CATCGAAATAGTCGAACTACACCTTACTTTTATATCGTTATACAAATTCAACACGACTGC
TTCGACTAATGGAAAAATACATAAATACATTACAATTTAGGCAACATTCTTATAAGTTTT
CGTACTCACATAATACTCTCACAGTCGATAAATCACTCGAATAACGAATCAAGTGTTTGA
ATAGTCGAATCGTAATCAATTTCGATCGATTTTGGAATGTCACAATCAGTTCTTTGTAGA
GATCGTGTATTCTTAATATGTGTTTTGTTTTATTTATTAATGAAACAAAACATTACAATA
AGAACTTCGCACAATTGATAAATTTTCTTGACACCAAAGTGTTCAGTCACAATTTCAAAA
ACCGGTCACTTAATAGTTCCACACATGTTTGTCACGATCTGCAGTTAACGCACTTTCGCG
TCATTTTCTTGTTCCCATTTACAATCTTCCCTTAATTATAGAGCTTTATCTATTTTTAAA
TAAAATAACGTTAAATTCATAATACAAATGGAAAAAAACTGTTTCACAATTTTATATTTC
AGAACATAATATGAACAGATTACTGTCATTATGTCATTCAAATAAAATTAGGATAGGACT
AAGTAACAGTCGGACAAAGTGACGAAATTTAGATACTATTTTTCTAGGACTTACAAAACA
AGGATTAAGGTTAGATTGTATATAAGTACAAGTGGTATGTTTGTCATAGTTTGTCGGGGC
GGACTAGTTGCGGTAGATGTAGGCGCAGGGTTGCGGGGCGGGGGGCGGCGGCGTAGGGGG
ACGCTCACCCGACGGCGACGGCGACGACGACGGCGGAGACGGGGAGGACGACGAGCCAGC
GCTCACCGTGCCCGACCCCGAACCGCTACTACGCTGAGACACCAACGTGTGGTGGTGATG
CGTATTATGTTTATGATGGTGCATCTGGTCGCGCGAGTCCGCCCCGCTTGTTTCTCAGAG
ATACACTTTCTTCACGGAACGCGTCGTCGAGAAGCCGTTGTCGTTGCCGCGCCGGTACCC
ATCGCCCTGGTGCGAGCGAAGGGTGCCGAAGTTGTCGCGCCTGTACGCGTCCGGCTGGAA
CTGGAACAGCGTCTCGTGGTGCGGGTGGTAGGGGGGGTGCTTGCGGAGCGTCGCGCGGGG
GGAGGCCGGCTTCGGCTGCGGCGCTAGTACCGGCTCCGCGTATGTTACTTCCTCTACTTG
CTGTAGTAGCTTGGGCTCCGCTTGGATTCTGTTAATATTCTGTCGCTGTTCAAAGTATTC
ATACTCCGTGTCAGGGTAAGGCATGTTATCGTCATCGTCTTTCTTGCATCTCCGTCCGCA
GATGTAGCCGGCTGCGAATCCAGCACCCAACGCGGCTAGGGCTCCAGCGGCTACTGCTAG
CGCGAGGGTCTCTACTGAGTATGCTGCTGGAGGTGGATCGGCTGCGAGGACTTCTGGACC
TTCATTATTATTGTTATTTCCCTTGCCATCTTTGTCTTGTACAATATTAATAACTTCACC
CTTATTTTCTCCTCTTGCATCATCATAAAGTCCTGAACTCAATCCACCAACGGCACCAGC
GTCTTTACTGTGCGGGCAGGCAGTGTGGCTTCCAGTACTAACGCTCTGGTAGAAGGAGTT
CTCATCCAACCACCTACTAACGCCGTGTGAATAGGCCCGACAGCGGCCAGCTTGCTTGTC
CCATGCGCAGTATGGGTCTTGTAGGGCTACGCATTCAGAACAAGAGCTGATCTTGTCACT
GGAACATCGATGCAGTCTCAAGCTCAGTACTTCTCTATCGGACACGGCTATAAGTCTAGC
AGCATCTCGTCCCGCGCGCGCCACACGTAGAGCTCGTACGGGCGAGCCCGCCGCGAACGC
TTGTAGCTCCTCGATAACTATGGGCACGGCTCGCTTGTTCGAGTCGTATGATATCGCGTT
CACGGCTTTAATTATTTTGCCGTTGTCTGTTCCAATAAATAAAACGTCATATGCCTTCCC
TCCAGGAGTTTTCACTTGTGGATCGACAGCGATCTGTGTAAATCTATAGTGAAAACTGGT
CCTAATAACAATAGGTTCTCCAAAAAACGCCGGAACAGACTCGTCCATCAAGGCGTGAGT
TTTGATGAAATTCAACGTTTTGTCCGGCAACAGTCTTGAGTCGTTATGACACGTTCCTGG
TCTTGGTTCAGGGACCTTAGCATTATTCACAGGTAACCAGTTCGAGTTGAAAGCGCTTTG
TTCCTTAAACGTTCCCTCGAATGTGTCTGCGATGTCCTGCATACTAAATGCACACACAGC
ACTGCCTGATATACTGTTGGGCGGAGTCGTGAATGTGCCGTATATTAGTTGGGCATTTAG
ACCACCGTAGGTACCTTCTATTAGTTCTGTCGTTGATTGAATCTCGTTAAAGTAAAATGG
AAAGTCTCCGGCGACTGAACAATTCAGTCTTGACTTTAAGAAGGACGTCCACCTTTGTTT
GAATCGATGTGGTCCGCCTCTGTCGTTTCGACATACTCTTGCAACTCTAGAAAAGACGGA
CTTGCCGCAATTAATATACTCCACTGCTGTCTCTCTGAAGAAGAAGTAAACAAAATTTCC
GTGCACCAAAGAGTTCACGAAATCAGGAGCGTTTAACGTCATAGAATCATAAGGCTCAGT
CTGCAAAGGTTCGCGATATATGATTGGCTCTATTCCACTGAAATCTGCTACTGTTCCAGA
ATATAATTCTCCGTCAGCGTAAACAGCTGTCGAATTGTGTTCTGGATCGTAAGGGCAGAC
TGCTTGCCCGGACTTTTCCCTTTCCATGTGATAAGAGTCTCTCTGGACTCCGTATTCTCT
GCAGAACGGCTTGAAGCTGTTAGTTCCGCAGACAAGTAGTCGTCCTGGCCCCAGGGAGAC
CAGAACGCGAATGTAATTTTGACAGCTCTCCTCATCTTTTCCTTTGACGACGCACATTTT
GACGTCATTCTCGGGCGAGTACCAGACGAGCCTGCGTTGCTCCGTCAGATCCGTCAAACT
TAAATTGTACACGACATTTCTGCCGCCTACGAGTAGGTAATTTCCATCTCGCAGTAATAA
TCTGAAGAAATCTGTGTGAGTTTCGTTTCCTAAGAACTTGTGCGTGTCGTCGACTCCTAA
TTGCGCGAAGACCTTAGGCCTGACGTTCTCCTGCCAGGCGGCGGCGGCGACGGCGACGAC
AGCCGCGACCAGGGCACAGCGGTACACGATCATGGCACTAGTCACAAGTCGTCATCACTT
GGAGATCACTCGCGGCACGCGGTCGAGTCGGGAGCGCGGCGAGCAGGCAGGGCGGTCG
(3478 bp)

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