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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR10702c1_g2_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_semaphorin-1A_isoform_X3_[Bombyx_mori]
Ontology
GO:0001755 P neural crest cell migration
GO:0001964 P startle response
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007411 P axon guidance
GO:0007416 P synapse assembly
GO:0008039 P synaptic target recognition
GO:0008045 P motor neuron axon guidance
GO:0008201 F heparin binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016199 P axon midline choice point recognition
GO:0030154 P cell differentiation
GO:0030215 F semaphorin receptor binding
GO:0030335 P positive regulation of cell migration
GO:0031987 P locomotion involved in locomotory behavior
GO:0045499 F chemorepellent activity
GO:0045792 P negative regulation of cell size
GO:0048813 P dendrite morphogenesis
GO:0048843 P negative regulation of axon extension involved in axon guidance
GO:0048854 P brain morphogenesis
GO:0050919 P negative chemotaxis
GO:2000305 P semaphorin-plexin signaling pathway involved in regulation of photoreceptor cell axon guidance
Transcript
Level		FPKM:2.41 TPM:2.36
ORF EntryO_TrvaFAMAMG11756_complete:A_TrvaFAMAMG_TR10702c1_g2_i1
Sequence
(Nucleotide)
GATTAAGCCCTTAAAGTATTGTTTCACCGGGCACCAACACCCTGTATATTACGTCTTTCC
TACTGCAATAACTACATTTGCGGCATTCTATTCGCTCTAATATCAGTCCAAAAGAAAATA
CTATTCATGCCAACGTTTGCAGCACGTACTTAGGCACTAAGTTATTACAAATAGAATTGA
CATTTCCTCACACACATTCAATCGTCAACAATGGGAGGTTGTAAACTATTTAATTTTTTA
TTCGAGGTGTATTAGAAAAGCTGTAACTCTAATAAAATTCCCATTAATTAACAGTGTCAA
CAACAGGAACATTCGAGACTATCAACATTTGGCCCACGATTATCATTCGGGAAACGACAG
ACGAAATGATAATACAATACATATAACGTATGTACAGGGTGATCACAGTTACATTTTGTA
ACCTTACTATACCGCACCAACCAGTTGTGGCAACAGTACCTACCTAATCTATCCATCTAT
GTATACAATCTCTAAATTCTATAAACATTATCGAATTATTTAAACGATCCCCTAAGAATC
TAGGTACACCCATAAGAAGCACTTTAATGAATGAATAATCATCAGAACTTTACAAGTTTT
ATACATGGTAAATATATAATTTTATGTTATTAAATATTATCATTGGTTTTGAATATACTT
ACATTTTTTCGACAATACATGACTAGCCGTAAATATTCGGATCGATATCGATTAAAATTT
GGATATCGATAGTAATCGCAATATGTTACATATAAAAATTATATGAAAAATCGATAACAA
CGTGTAAAGCAATCGGCAGTAGAAAGATATTCACAATGCCGTGATTTTAGCGTGTCGTCG
AGCTATACCTAACTTTAGAATAAAGGTTTATTCTTATATTTAATGACTTTATACTACAAA
TATTTATAAAAAGCGTTTTATGAAGCAATTGCATTTTTTTATATATTTTTTTTATTAGTA
GAATAACATGTCTTCCGATGTCCTTTATTTCAATAAAAAGGTAATTACTAAACTTGTCAA
ACTTTAGCAGATTAATCGTTTTGCGCACTGATATAAATTGGACCATTTATTTGGTCACTG
AATGTAGATACATAAAAAATGCAATTACGTTCATTTTTATAACTATTCTTCAACATTTTA
TTAACAAAACCTTATATCTTTCCCTAAATTTTATGTAAACTATTTAATATATCTCTAAAC
AATCTACAATTTGTTACATCATTTCTTATCATATCAATCGAGAATATTGATTCGCTCTTA
AAAAAATACACCTTTGTCACACGAGGAATTGTCCGTGGAATAGTGCATCGTGTGTTTCGG
AAGAATAACGTCACTTCACATCGAAATAGTCGAACTACACCTTACTTTTATATCGTTATA
CAAATTCAACACGACTGCTTCGACTAATGGAAAAATACATAAATACATTACAATTTAGGC
AACATTCTTATAAGTTTTCGTACTCACATAATACTCTCACAGTCGATAAATCACTCGAAT
AACGAATCAAGTGTTTGAATAGTCGAATCGTAATCAATTTCGATCGATTTTGGAATGTCA
CAATCAGTTCTTTGTAGAGATCGTGTATTCTTAATATGTGTTTTGTTTTATTTATTAATG
AAACAAAACATTACAATAAGAACTTCGCACAATTGATAAATTTTCTTGACACCAAAGTGT
TCAGTCACAATTTCAAAAACCGGTCACTTAATAGTTCCACACATGTTTGTCACGATCTGC
AGTTAACGCACTTTCGCGTCATTTTCTTGTTCCCATTTACAATCTTCCCTTAATTATAGA
GCTTTATCTATTTTTAAATAAAATAACGTTAAATTCATAATACAAATGGAAAAAAACTGT
TTCACAATTTTATATTTCAGAACATAATATGAACAGATTACTGTCATTATGTCATTCAAA
TAAAATTAGGATAGGACTAAGTAACAGTCGGACAAAGTGACGAAATTTAGATACTATTTT
TCTAGGACTTACAAAACAAGGATTAAGGTTAGATTGTATATAAGTACAAGTGGTATGTTT
GTCATAGTTTGTCGGGGCGGACTAGTTGCGGTAGATGTAGGCGCAGGGTTGCGGGGCGGG
GGGCGGCGGCGTAGGGGGACGCTCACCCGACGGCGACGGCGACGACGACGGCGGAGACGG
GGAGGACGACGAGCCAGCGCTCACCGTGCCCGACCCCGAACCGCTACTACGCTGAGACAC
CAACGTGTGGTGGTGATGCGTATTATGTTTATGATGGTGCATCTGGTCGCGCGAGTCCGC
CCCGCTTGTTTCTCAGAGATACACTTTCTTCACGGAACGCGTCGTCGAGAAGCCGTTGTC
GTTGCCGCGCCGGTACCCATCGCCATTGACCTGGTGCGAGCGAAGGGTGCCGAAGTTGTC
GCGCCTGTACGCGTCCGGCTGGAACTGGAACAGCGTCTCGTGGTGCGGGTGGTAGGGGGG
GTGCTTGCGGAGCGTCGCGCGGGGGGAGGCCGGCTTCGGCTGCGGCGCTAGTACCGGCTC
CGCGTATGTTACTTCCTCTACTTGCTGTAGTAGCTTGGGCTCCGCTTGGATTCTGTTAAT
ATTCTGTCGCTGTTCAAAGTATTCATACTCCGTGTCAGGGTAAGGCATGTTATCGTCATC
GTCTTTCTTGCATCTCCGTCCGCAGATGTAGCCGGCTGCGAATCCAGCACCCAACGCGGC
TAGGGCTCCAGCGGCTACTGCTAGCGCGAGGGTCTCTACTGAGTATGCTGCTGGAGGTGG
ATCGGCTGCGAGGACTTCTGGACCTTCATTATTATTGTTATTTCCCTTGCCATCTTTGTC
TTGTACAATATTAATAACTTCACCCTTATTTTCTCCTCTTGCATCATCATAAAGTCCTGA
ACTCAATCCACCAACGGCACCAGCGTCTTTACTGTGCGGGCAGGCAGTGTGGCTTCCAGT
ACTAACGCTCTGGTAGAAGGAGTTCTCATCCAACCACCTACTAACGCCGTGTGAATAGGC
CCGACAGCGGCCAGCTTGCTTGTCCCATGCGCAGTATGGGTCTTGTAGGGCTACGCATTC
AGAACAAGAGCTGATCTTGTCACTGGAACATCGATGCAGTCTCAAGCTCAGTACTTCTCT
ATCGGACACGGCTATAAGTCTAGCAGCATCTCGTCCCGCGCGCGCCACACGTAGAGCTCG
TACGGGCGAGCCCGCCGCGAACGCTTGTAGCTCCTCGATAACTATGGGCACGGCTCGCTT
GTTCGAGTCGTATGATATCGCGTTCACGGCTTTAATTATTTTGCCGTTGTCTGTTCCAAT
AAATAAAACGTCATATGCCTTCCCTCCAGGAGTTTTCACTTGTGGATCGACAGCGATCTG
TGTAAATCTATAGTGAAAACTGGTCCTAATAACAATAGGTTCTCCAAAAAACGCCGGAAC
AGACTCGTCCATCAAGGCGTGAGTTTTGATGAAATTCAACGTTTTGTCCGGCAACAGTCT
TGAGTCGTTATGACACGTTCCTGGTCTTGGTTCAGGGACCTTAGCATTATTCACAGGTAA
CCAGTTCGAGTTGAAAGCGCTTTGTTCCTTAAACGTTCCCTCGAATGTGTCTGCGATGTC
CTGCATACTAAATGCACACACAGCACTGCCTGATATACTGTTGGGCGGAGTCGTGAATGT
GCCGTATATTAGTTGGGCATTTAGACCACCGTAGGTACCTTCTATTAGTTCTGTCGTTGA
TTGAATCTCGTTAAAGTAAAATGGAAAGTCTCCGGCGACTGAACAATTCAGTCTTGACTT
TAAGAAGGACGTCCACCTTTGTTTGAATCGATGTGGTCCGCCTCTGTCGTTTCGACATAC
TCTTGCAACTCTAGAAAAGACGGACTTGCCGCAATTAATATACTCCACTGCTGTCTCTCT
GAAGAAGAAGTAAACAAAATTTCCGTGCACCAAAGAGTTCACGAAATCAGGAGCGTTTAA
CGTCATAGAATCATAAGGCTCAGTCTGCAAAGGTTCGCGATATATGATTGGCTCTATTCC
ACTGAAATCTGCTACTGTTCCAGAATATAATTCTCCGTCAGCGTAAACAGCTGTCGAATT
GTGTTCTGGATCGTAAGGGCAGACTGCTTGCCCGGACTTTTCCCTTTCCATGTGATAAGA
GTCTCTCTGGACTCCGTATTCTCTGCAGAACGGCTTGAAGCTGTTAGTTCCGCAGACAAG
TAGTCGTCCTGGCCCCAGGGAGACCAGAACGCGAATGTAATTTTGACAGCTCTCCTCATC
TTTTCCTTTGACGACGCACATTTTGACGTCATTCTCGGGCGAGTACCAGACGAGCCTGCG
TTGCTCCGTCAGATCCGTCAAACTTAAATTGTACACGACATTTCTGCCGCCTACGAGTAG
GTAATTTCCATCTCGCAGTAATAATCTGAAGAAATCTGTGTGAGTTTCGTTTCCTAAGAA
CTTGTGCGTGTCGTCGACTCCTAATTGCGCGAAGACCTTAGGCCTGACGTTCTCCTGCCA
GGCGGCGGCGGCGACGGCGACGACAGCCGCGACCAGGGCACAGCGGTACACGATCATGGC
ACTAGTCACAAGTCGTCATCACTTGGAGATCACTCGCGGCACGCGGTCGAGTCGGGAGCG
CGGCGAGCAGGCAGGGCGGTCG
(4642 bp)

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