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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR10702c0_g2_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_cadherin-23_[Bombyx_mori]
Ontology
GO:0001917 C photoreceptor inner segment
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005813 C centrosome
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006816 P calcium ion transport
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007605 P sensory perception of sound
GO:0007626 P locomotory behavior
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016339 P calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0032420 C stereocilium
GO:0032426 C stereocilium tip
GO:0042472 P inner ear morphogenesis
GO:0042491 P inner ear auditory receptor cell differentiation
GO:0045202 C synapse
GO:0045494 P photoreceptor cell maintenance
GO:0046872 F metal ion binding
GO:0048563 P post-embryonic animal organ morphogenesis
GO:0048839 P inner ear development
GO:0050953 P sensory perception of light stimulus
GO:0050957 P equilibrioception
GO:0051480 P regulation of cytosolic calcium ion concentration
GO:0060088 P auditory receptor cell stereocilium organization
GO:0060091 C kinocilium
GO:0060122 P inner ear receptor cell stereocilium organization
Transcript
Level		FPKM:5.19 TPM:5.08
ORF EntryO_TrvaFAMAMG11754_complete:A_TrvaFAMAMG_TR10702c0_g2_i1
Sequence
(Nucleotide)
GTGTGCAGTCGCGAGTCGTGACACCGCGCACCTGACGCGACCGGGAACCGTGCTACGGAA
GTGCAGTGAATCACCGGCCTTATACTGTTCGATATTTCAATTGGAAAGCCATCTTTTTTT
ATTGCCGGCCAGTAAAGAGGTGATCGAGAAACAGTCACGTAGAAGAAATTAAGCGTTCGG
AGTCACAAGGTGACACTTTCACCGGTTCAGCACGCGTCTGGTCTTCCCACGGAGAAATCG
TGCGAAGGAAATCGTCAAGAAAATGCTTTTTGTTCCATCAGCTATTGAAGATCAATGTGT
CAGATGACTAACAAGAATGAGAGCGAGGACGCCTCCGAGAGCCCGGTTAAAGCTGGCGAA
GTACGGAAACCTCGTTTTCTGGCTGGTTTTCGTGGTTGGAGGAGTAGTCGCAAATAGACC
ACCTCGGTTTCTCATAGATGGCCAGTCGGAGATCGTTGTGCGGCTAAAGGAAGGTCCTGA
AACTCCTGTAGGTAGTCTAATATACCGTCTGAGAGGCGTTGACCCTGATGGGGATACACT
ACAATTTGGTTTAAGAGAGCAGCCAGGCAGTGAAATATTAAGATTAGAAGCCATTTCATC
CAACGAAGCTAATATATACTTAGTTAAGGAATTAGATAGGGAAATCCGTGATGAATATTC
TTTTGTATTAACACTAACCGATGGACACTTAGGAGAAGGCAACTTTATCACGCAGAGTTT
TTTGTTACTCGTTGAAGACATTAATGACAACGAACCAGTCTTTAAACCTTATCCCTCCGC
AATAAACATAAAAGAAAACTCTCTTCCTGGTGTCATTGCCACAGTAGAGGCCACTGACCT
TGATGAAGGTGCTTATGGACAGGTTTTATACCACCTCCAAGAATTAGACGGCGATATCGA
AAACTTCGCCGTTCAAACAGTGAACGGTAAAGGGGTCATCCGGCTCAACAATCGTTTAGA
TTACGAACGAAAACCTCTTTACCAACTTCGGGTTCTGGCAGTAGATCGAGCCAATCAAGG
CAAAGTGAACACTGGGACTGCAGCTATATTAATAAAAGTACAAGACGTTGAGGATCAACC
GCCTGAGTTTGTAGTAGCGAGTCCTGTAACACGAATTAGTGAAGATGCGCCGGTCGGTAC
AGCTGTGTTGCAAGTGCGAGCAATTGATGGAGACAGAGGGATCAACAATCGTATCTCATA
CAGCATCATATCAGGTGGTGAAGAGCATTTTGACATTGACAGCAGTTCTGGAGTTGTGTA
CACAGTCAATCAGCTTGATAGAGAAGACCCTAACAACAGCAATGGAGCCTACATATTGGA
AATACTGGCTACAGAGGAATCACATGAAATATCACCAATGCCAAGTGCCACAACTGAAGT
CACAATAATAGTGACGGATGTGAATGATGAAACCCCAAAGTTCAGGAGTCCAAGATATGT
GGGTGAAGTGTTAGAGAATGCTCAACAAAGTACACCCATCACTCTGCTGCAAGATGCCAT
ACCGGAAGTCTTTGACTATGATCAAGGAAAGAATGGTACATTTGAATTGTACCTGGTCGG
TGATAACGGAGTATTTGATGTCACACCTTTTAAAGGAATAAACGAAGCATCATTTCTTAT
TAGAGTGAATGATCCATTATCCTTAGATTACGAGAGAATAACGGTCATGAACTTCAGTCT
AGTCGCCAAAGAAATAGTTACCAAAGATCCAAAAATGAGTGTAGTCCCAATAACAGTACA
TATAAAAGATGAGAATGACAATTTTCCCGAGTTCACGGAATCATTGTACACTGTATCGGT
ACCTGAGAACTGTGGTGTAGGTACTACAGTCGCTTGGGTTCAAGCTTTGGACCAAGATTC
AGATAATTACGGTACCAGAGGGATACGGTACACGAATTTGGGAGGCAGTATTGCTAATTT
ATTAAACCTTAATCCAATATCAGGAGTGATAACAGTTAAACAATCCGGTGGTGACAGTTT
CGATCGCGAATTAATTTCCCGCCATTATCTCACAGTCGAAGCGAGAGATGATTTAGGCAA
AGGAAATAGGAATACAGCCCAATTAATTATAAACATTGAGGATGTGAATGACAATGCTCC
GATATTTTTAGCTAATAAATACGAGGCCAGATTGCTGGAGAATGAAAAGCAATTTGAGAC
TCCACTTGTACTAGAAGCTAGAGATATTGATTTAAATGGTACAAAAAACAGTCACATAGA
GTACTCAATAATTGGAGGTAATTACAGGAGCAATTTTAGCATAGATCCTAACTTAGGAAT
AATAACTCCTAAAGGTGGATTGGATTTCGAACAACTAGCCGGCGGTAATGGAAACATAAG
GCCTATTCATTTAACTATAAGAGCTCGCGATTTCGGCACGCCATCTCTCTCGTCCACAGT
GCCCGTAACTATCTACGTGCAAGACGTTAACGATCACGCACCGATGTTCCAACAGATGAC
ATACAAACGAGCTATACCTGAGGATATGCCGGGAGGAACAAGTGTTCTTGAAGTAAAAGC
CCGCGACGCCGACGGTTCGTCTCCGAACAACCGCATAGTGTACCGCATACAACGAGGAGC
GAGCGACAAGTTCGTGATCGACTCTCGTACGGGCGTCGTGTCTGTAGCTAACGGATCCAC
ATTAGACCCGGATAAAACTAATCCGAAAAGCACGCGGTATACTTTAACTGTGGTGGCTCT
CGACGGCGGTATTGGTGATCAACAATTGAGCGCAGCCGTGTTAGTGAACATCACTATAGT
GGATGTCAACAACAAACCGCCGGTACTATTGGAACCAGGATCGGTCACCGTACGGGAAAA
TATTCAGGTTGGAACTCAAATATACCAAGCTAAAGCATTCGATTTAGACGATCAACCGGT
ACTTCGATTTGGAATCGATAAAGCAAACAGCATCGCTCGGAACGAAGACGGTGTACCGAT
ATCGATTAACGAATACGATTATTTTAGTTTGTGGGACTTGAATGCTGTAGACGGTACTTT
GAGGGTTGCTAGGTTATTAGATCGAGAGAAAATCGAAACGTTCAAACTAGTTATAACTGT
GGAAGATATGGCCGCTTTGGATGGTGGACCACGACAAACGGCCACTGGTACCCTGACGAT
CACCGTCGATGATGAAAACGATAACAATCCGATATTTCGTAAACCGTTTTACAAAACATC
GATTACGGAAAACTCTAAAAATGGCGTCAATATCGTGAACGTGATTGCTGATGATGCAGA
TAGGAATAGAACGATGACTTATTATATTGAAGGTCGTGAAGAATACTTAAACATGGTTCA
CATGGAAAGTGCAACAGGAGAACTAGTTGTAGCTAATAGGATCGACCACGAGTTGTTCCC
GTGGATCAACTTGACTGTGAAGGCTGTTGATAATGGAGTACCGCCTAGATATTCGGTCGT
TGATTTAACTGTACAGGTGTTAGATGAGAATGACAACAACCCTATATTCGAGTCATCCGG
TTTCGAATATCAAGTACGAGAGGACGCCGAGCCCGGTACTGTGGTAGCGACGGTCACCGC
TAAAGATGCAGATTCAGGAGAGAATGGGAAGATTACTTATCTTTTAGATAGAACATCGAC
ACAGGGTAAATTCCTTATAAACGGCGACACCGGAGCGTTAACTGTCTCTGATTGGTTGGA
TCGAGAGACGCAGGGCTCATACAACCTCGTGGTAGAGGCCTGGGATAACTACCAGTTCGG
ATACCTCAGTGGGGAAAGTAGAAACGCTTTCAAACAGATTGTCGTCCACATAGAAGACGT
AAACGACAACCCTCCAATACTGAACCTTCCATCCGACTGCACCACCATCACCGAGTTCCA
CAACCACAGGGAGCCCATACTGTCCGTGTCCGCGACGGATGCAGACGACAACTCCACTCC
TAACGGGCGAGTTCAGTTCCATCTAGTGGCCGGGAAGGGACACGAGTTATTCCGTTTCGA
GCAAATCGGCGGCGACGCCAACACGGGCCGGCTGTTCGCTCGCCAGTCGCTCAAGGATCG
CTTCGGGAACTACACGTTGGTTGTGGAAGGGCGGGACCTCGGCGTGCCTTCTAATGTCGT
TAGAGGAGAGCTGAGATTGTGTGTAACTGATTATAACGATCATGCGCCCGTGTTTGTGCA
TCCGCAGCATAATGTCACTATTAAAGTGCCTGAGAACGCCACAATAGGTACAACGATAGT
CGAAGCTAAAGCTATAGACGCGGATATAGGACCGAACGGAGCCGTCAGATATCGATTAAA
GCGAGACGCGAGCGGCGCGTGGCGAGCCTTCTCATTGCACGCCACTAGCGGGGCGCTGCG
CACGATACTACCGCTCGATAGAGATAAACAGACTACGTACCAGCTAAGAATCGAGGCATA
CGACCTAGGGTTGCCAACACCACTGAGCTCAGATCTAGATCTCACAATATACGTTCAAAA
CGTCGACAACTACAGACCAAGGTTTCCGTTCAAATCGTTCAATTTGAATATAACTGAGAA
CGAAAAGTCCGGGAATGTTTTTCTTCCAAGTGTTATTGAACGAGACGCGATAGATCGAGG
CGATGAACCGGTGTTGCCAGTTTGTTACTATATTGTTAATGGGAATGAGGACGGAGCTTT
TGAACTGCATAAGAACACGCATAGATTAACAACAACAAAACCTTTAGACCGTGAACGAAA
TTCAAACTACAGTTTAACTATTTTCGCAACTGAAGACTGCATTGACATACCCAAATACAC
GTCAGATGATCACGTGAGCTCTCTAATAGTTCACGTGTCTGTGAACGATGTTAATGATAA
CGCGCCCAAGTTCACTAGGAGTATATTCACTGGAGGTATTACTACTAAGGCTGATTTCGG
AATCGAGTTTATGCATGTACAGGCCATAGATCTAGACGAAGGTGAAAACGCAAAGATAAC
TTATTATCAAATAGGAGAAATAAAACAAACTTTAACAGAGGGTCTGGATAATTTGGCTGT
TTTACCCTTTCTTATAAACCCAGAGACTGGTGCCGTCTCATTGAACTTCGATCCGCAGAA
GGGCATGAAAGGATACTTCGATTTTCAGGTACTAGCAAACGACACAGGCGGACTACAAGA
CGAGGCCCACGTGTTCATATATTTACTAAGAGAAGATCAAAGAGTACGTTTCGTTTTACG
TTCTCATCCGTCCGAAGTGCGGGACAAAATGAACACGTTTCGCGAACATTTGGCTCGAGT
CACAGATTCCGTTGTCAATATCGACGATTTGAGGGTACACGAAAACAAAGATGGCTCCGT
TGATAATACGAAGACAGATCTGTATCTGCACCTCGTTAATGGACAGGATCATTCTGTTCT
CGAAGTTACGCAAGTCTTGAAGATTGTTGACGAAAATATCGAACGGCTTGATGATTTGTT
TAAGGAATTTAACGTCCTGGACACGCAACCGGCCGAGTACCAGCCCCTCACGGCCGAGAC
TATGGCGACCAATCAGACTGTATTCTGGCTGGTGTGGACGGCGCTGTTCCTCGCTATACT
ACTGGTGCTCACTATAATGATGTGTTTGTCGCAACGGGCGGATTACTTGAGGAGACTGAA
GGCTGCCACTGCTACGTCTTATTCTTCCGCAATACCAGGTGAATCGGACATGACGATCCG
AAGCACCGCGGGACGAGTGCCAAACACAAACAAACACAGCACCAAAGGATCCAATCCAAT
ATGGCTGCACGCCTACGAAAACGACTGGTACAAAACAGACGATCAACTGAGCAGATCCGA
CAGAGATTCGTTGGACGAAAACGCAGTAGATCAAGACTTATCTAACGAGAAACCTTATTT
TATAACCACGGCTGCATTTCCCTCGATAGATTCGACTGAAACCGAACCTCAGACGAATCA
GCCGAAATCGGACTTGTTCCAACAGCTGGAGCATTTGAAAAACGCTAAGAACATGGAGAC
GACTGAATTGTAATTTAGTATAGTTTATTGTGCCTTTGTAAATTGTGTACCTCTTATTTA
ATTTTTTTCAGGTTTAATACAGAATAGTAAAATAAAAAAAAAA
(6043 bp)

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