SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR10685c1_g1_i11
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_potassium_voltage-gated_channel_protein_Shab_isoform_X3_[Bombyx_mori]
Ontology
GO:0001508 P action potential
GO:0005216 F ion channel activity
GO:0005244 F voltage-gated ion channel activity
GO:0005249 F voltage-gated potassium channel activity
GO:0005251 F delayed rectifier potassium channel activity
GO:0005267 F potassium channel activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006813 P potassium ion transport
GO:0007268 P chemical synaptic transmission
GO:0008016 P regulation of heart contraction
GO:0008076 C voltage-gated potassium channel complex
GO:0008345 P larval locomotory behavior
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0034765 P regulation of ion transmembrane transport
GO:0048812 P neuron projection morphogenesis
GO:0051260 P protein homooligomerization
GO:0055085 P transmembrane transport
GO:0060025 P regulation of synaptic activity
GO:0071805 P potassium ion transmembrane transport
Transcript
Level		FPKM:11.40 TPM:11.17
ORF EntryO_TrvaFAMAMG11534_complete:A_TrvaFAMAMG_TR10685c1_g1_i11
Sequence
(Nucleotide)
TTTTTTTAACAATTTCGGAAAATGTTTAATTTTAATAATTGCTTCTTTTTCAACTACGCT
GTACAAACTATTTCGCTTACATTATAATTAGCAATTAATAATTGCACGTAAAAAAACTTA
ACAAATAGTTACCATCAACTTTTTGATTGGAATGAACAATTATTACAATATATATTTTAC
AATATTTATAAACCTACTAAATGAAATTCTATAATCTCAACAAGCAGTCACAATCGCCCA
ATGATATGTTAAAATTGAATATATTATTGCATTCTAAGTACTAATTTAAGGTCGTTCGCG
TCGATTGTTGAGGCGAGGCGTGTCGAACTATGCTGAGAGGGACCGTGCGTGTGACGTCAC
GCACAAGCTCCAAGCGATCTACGTCATAACATTGTCCCTCTCCGGTGCTCCACCCTTGTG
GTTTTGGCCTTTGAAGTCTTTTAGTCGGATAGGCGATGACTCACTACCAGAATCACCATT
AGCGCCTAGTGATGTATTCTCCTGCAGAAGCAGCTCGCTGTCTGTTCCCCGAGACTCCTT
GTTCTTCAAGATCGATCGGGAACGAGAGTCACCTTCTAACGGCCAGCCGCCTCCTCGCTT
ATTGCCATTTTTCCCAAATAGAATATGGTGATTGATAATCCTCGTTGCTATACCCCTCGG
CGGCTTCCTCTCTTCCTCCGCCCAGTCCTGCTGTTGGAAGCGAGCTTTTCTGTGTTTAGG
CTTGGTGTCATCAGGCAGGTCGTCGAGCGGCTGCGGCAGGCTGGTGCGGGACGCGCTGGC
GTCGAGCGGACGCACGCCGGAGCCGCCGAGGCTGGCTCGCGAGCCAAGCGGGGAGTGCGG
GGACACCTCCTGCGAACCTTTCGCACACAACTCGGCCGCGTCGCCGGACGCGCTCCGACG
GACCCCCCCACCACCACCACCCCCGCCGCTACCGTCCAGAGGATTCACATACAAGTTTGA
CGAGTCGTTCTCGCCTGCGATGTCTCCCTCTGGGCTATCCAAGCTGTTTGGTGTGGCTTC
TGGAAGGGCTTTAGGCGCAGGGTGTCGCTGGAGGCAGGCCAACTCTACACACACTGGCTG
ACGCAAGTCGGATGTCGACATGGGCATCAACTGCTCTGCATCTATGAACTCCTTGTACCC
CTTGAACGTGCAAAAACAACATTCAAATTCAGAAGGCAGCTGATCCAAGTCAAGCTGTTT
GTCAGCCATCTTCTTATCAGGTGTTGGCTCAGGATTTATGAGAAGTCTTTTCTCGGGAGT
TCCTGGAGCTTCATTGGAATACCGCCTCTCCTTTTTAGGACTACCCTGATTTGATTCCGT
GTTGAGAGGAAGTTTGTTGGGTATGTTGTGGTCATATTGCTTATAGCAGCCAGTGGTCGC
GGGAGCCTCACCCTCCAGACTAGTAGCGTCCGCCTGCGACAAGTTGTGTCCTGAAGACAC
ATACCATCATCACTAGCGACGGTTTCATTAATTTTTGCATGACATCGAGCGTTCAACACA
ATTTTGCAACAACAGCTCAAAATTACGCGGTGACATTAAAGTGAATCTACTTTAACTTAA
CTACACACAACACACATTCAACACAAATAGTTTAAAACCCAGCGTCCTCCGGAAACACAC
ACCGGACAGTCCACAAATAGGGTTTGTTAGTTCTAAAGAGCGTTAGGCTAATGCTAACAA
TGGAAACGACCTTAGAATATAGTGTCTTCGTCGCACATCGCAAGCTACACGCGACGCGAA
TCCGACCCCATGTAACTGACTTTATAATAAGGGGTCATGTGTGACGATTGTGTCTTAGAA
GTAAGTAGTTCATCTGGCGTCGTCTCTCGCCTCAATGAGGACGCACTTGTCACCTGTATC
AACAATGACATCGATGAGATCCATGCTCTTGGCGAACGCGTCTCGCAGGTTTATGTGGTG
AAAAGATACAATGGAGCCCTCGCGTTTTGCTCGCTCGAGAGCTTCGCGCCGCTTGAGAGC
TTTCTCGCGCCGCATCTGATTCTTGTAAAACTCGGCGAAATTGTTGACGATAATGGGAAT
GGGTAACGCAACTACCAACACGCCGCAGATACAGCATACCGAGCCGATGACCTTGCCCAA
CGGGGTCGTAGGGTAAATGTCACCGTATCCGACTGTCGTCATGGTGATGCCGGCCCACCA
GAAAGTTTCCGGAATCGAAATGAATTTAGTACCGGGTTCTTCTTTTTCGGCAAAGTATGC
CAGTGAAGAAAATATAAGCACTCCCATAGCGAGGAACAACATTAGAAGGCCGAGTTCTTT
GTAAGAGTTTCTGAGTGTAAAACCGAGAGATTGTAACCCGGTCGAATGTCGTGCAAGTTT
GAGGATGCGCAATATTCGCATGATACGAAATACTTGAACTACTCGACGCACGTCTTGAAA
CTGATCTGTAGCGTTTTTATTTGTTTCGAGTAGAAACAGAGATACAAAATAAGGCAATAT
TGCCAGTAAGTCTATAACATTTAGTCCACCCTTAAAAAATTTCCACTTATCCGGCGAGGC
ACTAAATCGTAGCACATATTCGAGCGTGAACCAAGTGATGCATACTGCCTCAACCATGGC
CAGCTTCGGGTTATCCATCGGGCCTTTGTCATCGTGAACTTGCAATTGTGGGATTGTATT
CAGAGTGAGCCCTATCGTGGAGAGCACGATGAAAAGAATTGATATCACAGCAATCACCCG
CGCCGCAATGCTCGTTGTCGGCTTCTCGAGCAAGTCCCAGAGCCATTTCTGGTATTGAGC
GCATGTGCCCTGACCAAACTCCTCTTCTTCCCGCTGTCTTAAACTTTCTGCTTCTTTACG
CATTTCTTCATGAACGTGCTCCTTCCGTTGATGATATTTGTGCTGACAACACGACTCTAG
ATACAACTCATCTACGCCCCAATACTCGAGATCATCACTGAACGCCAACACACACATTTC
ATCCACTAAGTGAAGTTTACCAGTTCGATAGAAATTTAAAATTGAACTGAAGCTTTTTGG
GTGCCTATCAAAAAAGTATTCATTGTCCTGTAATGAATAGTCATCGCAGAGTTCCGTGAT
GGCCTCGTGCGTATTGCAATCCCGCAGCCTGCCGAGCCGCGTGTGAGGCAATCTCTCCAG
GGTCCTCCACAGCACCTCGTGCCGCACCCCACCCACGTTGATAATGACGCGCTTGCTCAA
CGCTTTGGCACGGAGCATCATAAACGGCTCCGGCGGTAGCGACGACATCGACCTGGAGTG
GGCCCGATGCAGCGCTGCGTTGGCGGCATTGGCAGCGATGACAGGTGCGGGGGCCGGAGC
GAGCCCCCTGTCGAGCAGCGCGTCGTGCGCGGGCGCCGCGAACCCCATGGCGGGCGCGCG
CGGGGGCGAGTCGCCCACGTGACAGCGCGCGGCGCCGCGGCCCGCCCCCTCGCCTCCCAT
ACTGCTAGCTCATGGCGCCCACCGCCGCCGCCGCATCCCTTCTAGCATCACCATACCACC
ACAAGCCGCACTCACTCTGTATGACCTTGGAAGATGGGGTTCTGACCAAAGAGATCTTAT
GGCTCACGTGCTGAAACAGAAGACAGAATCCTGCAAGGTCCTGCTGTGGTTCAGGGTTTG
ATAAGTTTCTGTAATATTTCCGACACTATAATCAGGTTCTCAAGTAGCAGTGATCACGCA
GAAACCTTCAGGTCATATTGTTTTTGAATAAACGATCATATAATACACGCGCGATCGGAG
GTTTGTAGGGACGATATGTGTCGCGCCAGGTGAGGGCGAGAGAAGCCGGCTGCAGAGCGC
GCGGAAGCGAACTGCCTGACTCCGAGTGGAGTGCTGCCCGCCCGACGCGCGCTGTCGCTA
TTTGCGCGCCCGCTCGCCGCCCACCCCGACCGCGG
(3875 bp)

- SilkBase 1999-2023 -