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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMSG_c6129_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_protein_DEK-like_isoform_X2_[Plutella_xylostella]
Ontology
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0007165 P signal transduction
GO:0016568 P chromatin organization
GO:0019079 P viral genome replication
GO:0042393 F histone binding
GO:0043292 C contractile fiber
GO:0044822 F RNA binding
GO:0045815 P epigenetic maintenance of chromatin in transcription-competent conformation
GO:2000779 P regulation of double-strand break repair
GO:2001032 P regulation of double-strand break repair via nonhomologous end joining
Transcript
Level		FPKM:3.27 TPM:2.09
ORF EntryO_SariMSG1234_5prime_partial:A_SariMSG_c6129_g1_i1
Sequence
(Nucleotide)
GGGCAGTAGCAGCAAGGGGAAGAAAGGAAAGGGTAAACCTAGCCGCGGTAAGCGAGCAAA
GTCGGAAAGCGACGAGGAAAGTGAAAAATCTGAAAGCGAAAGCGAAGCAGAATCTGGCAG
TGACGGAGAAGAATCTGATGAGCCTAAAGCAAAGCGTGGTCGGCCAAGTGCAGTAGCCAA
GGGACGTAAGGGACCCGTCGCAAAGAACTCTAAAGCGACGCCCGTCAAACGGAAAGCACC
AACACCACCAGCGAAAAAGAAGGCGCCGGTGGGCAAGGCGGCTGGACGACCTGCCAAGAA
GGGTAAGAAGGCCTCCTCGGACGAAGAATCCGGCGAGGGGAGCGAGGAGGACGAGGAGGA
GGAGGAGGGTGGCAGCGACGAGGAGAGCGGAGAGGACTCCGACGCACCCGCCGATAAGAA
GGCCAAGCGACCGCCCACTGACGATGAGATTAAGAAGTACGTGAAGCAGATACTGGAAGG
CGCTAATCTCGAACAGATAACAATGAAGACGGTTTGCAAGCAGGTCTACAGTCACTATCC
GGACTTTGATCTCGCGCACAAGAAGGACTTCATCAAGGCCACCGTCAAGTCGTGTATTTA
AGATGTTAGGAGCTAAGGGAGCAGTGTAGATGTCTACATAGTATACCTATAGTTTATAAA
GGACATAGTTATATATTATT
(680 bp)

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