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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMSG_c454_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		protein_DEK_isoform_X3_[Bombyx_mori]
Ontology
GO:0003674 F molecular_function
GO:0003677 F DNA binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0008150 P biological_process
GO:0016568 P chromatin organization
GO:0042393 F histone binding
GO:0043292 C contractile fiber
GO:0044822 F RNA binding
GO:2000779 P regulation of double-strand break repair
GO:2001032 P regulation of double-strand break repair via nonhomologous end joining
Transcript
Level		FPKM:111.42 TPM:71.12
ORF EntryO_SariMSG120_3prime_partial:A_SariMSG_c454_g1_i2
Sequence
(Nucleotide)
CGTGCATTTGTGTTGTCCGGTGTTTGAAGACGCTTGGAATTCGCTTTCAATTTCTTCGTA
GGAAAAATGTCGGGTGATACCGATAAAGCGAAAATCAGTGACAATCAGGATGAAGACAAG
AAATCCGGTGCAGGCGATGGTCACACGACAGAAGACGAGTCATCACAGGACTCCAAGGGT
GAGTCCCAGCAGTCGCAGGAGCCCAAGGCCCAAGGTAACGCCGATGTAGATCAACCGCTT
ACGAAAGGGGAGGAAATACCAAATCTCGAAGGTGATGCAAAAACCACAGCCAACGGTAAA
GACGATGAAACTGGCGGCGACGATTCAAAGAGTGACAAAGGGAAATCTGATGGTGACATT
AAGAAGGAGGAAAATGGAGAAACGCACGATGAGGATGAAAAAGATGATGTAAAAGCCAAT
GATAAAGGGGCAAAGAAAGCAGCTCCCAAAAAGAAACCTAAGAAAGAGGAAACAGAAGAA
GAAGATGAGGAGGAAGATGAAGAAGACGAGGAAGAAGATGAGGAAGGTGATGAAGGCGAC
GAAGAAGAAGAAGATAAGAAACCACCAGCTAAAGACAAGGTAAAGAAACCTGCTAAAAAG
GCAAAAGAGCCCGACGACGGCGAAGAAGACGAAGGAGAAGACGAGGAGGAAGAAGAAGAG
GAAGAGGAGGAGGAAGAAGAAGAGGAGGCACCCAAACCTAAACCCAAGAAGGAACCAACA
GAGCCTCCTGTGCCTCTACCAGCCGGTAAGGGAATTCCATTGGGTCACATTAGTAACGTC
GAGGTTTCACTATCGAGGTTCAAGACTCAAGACCAGAAGTTGTTACATCAGTATTTGTAT
GGACAACTGTGCTTAGACCGTAATGTGAAGAGAAACATAAAGAAGTTCAAGGGATACGAG
TGGGCCATTGGTTCAACAGAATATAAAGCTAAACTTGAAGAGACAACTAAAATGGAAATG
AAACAAATACGCACCATGTGCGAAATGCTCGATTTGGATAAGAAAGGTTCAGCGAGTGAG
TTGAGTGCGCGGCTCGTCGGTTTCCTACAGCAGCCAACTGCGAACTCACCGCACGCGCGC
GGCGTCGCCCGCGCCCCCGCCGCCGCCGCGCCCGCCGCAG
(1120 bp)

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