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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMSG_c454_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		protein_DEK_isoform_X3_[Bombyx_mori]
Ontology
GO:0003674 F molecular_function
GO:0003677 F DNA binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0008150 P biological_process
GO:0016568 P chromatin organization
GO:0042393 F histone binding
GO:0043292 C contractile fiber
GO:0044822 F RNA binding
GO:2000779 P regulation of double-strand break repair
GO:2001032 P regulation of double-strand break repair via nonhomologous end joining
Transcript
Level		FPKM:26.68 TPM:17.03
ORF EntryO_SariMSG119_3prime_partial:A_SariMSG_c454_g1_i1
Sequence
(Nucleotide)
CGTGCATTTGTGTTGTCCGGTGTTTGAAGACGCTTGGAATTCGCTTTCAATTTCTTCGTA
GGAAAAATGTCGGGTGATACCGATAAAGCGAAAATCAGTGACAATCAGGATGAAGACAAG
AAATCCGGTGCAGGCGATGGTCACACGACAGAAGACGAGTCATCACAGGACTCCAAGGGT
GATGCAAAAACCACAGCCAACGGTAAAGACGATGAAACTGGCGGCGACGATTCAAAGAGT
GACAAAGGGAAATCTGATGGTGACATTAAGAAGGAGGAAAATGGAGAAACGCACGATGAG
GATGAAAAAGATGATGTAAAAGCCAATGATAAAGGGGCAAAGAAAGCAGCTCCCAAAAAG
AAACCTAAGAAAGAGGAAACAGAAGAAGAAGATGAGGAGGAAGATGAAGAAGACGAGGAA
GAAGATGAGGAAGGTGATGAAGGCGACGAAGAAGAAGAAGATAAGAAACCACCAGCTAAA
GACAAGGTAAAGAAACCTGCTAAAAAGGCAAAAGAGCCCGACGACGGCGAAGAAGACGAA
GGAGAAGACGAGGAGGAAGAAGAAGAGGAAGAGGAGGAGGAAGAAGAAGAGGAGGCACCC
AAACCTAAACCCAAGAAGGAACCAACAGAGCCTCCTGTGCCTCTACCAGCCGGTAAGGGA
ATTCCATTGGGTCACATTAGTAACGTCGAGGTTTCACTATCGAGGTTCAAGACTCAAGAC
CAGAAGTTGTTACATCAGTATTTGTATGGACAACTGTGCTTAGACCGTAATGTGAAGAGA
AACATAAAGAAGTTCAAGGGATACGAGTGGGCCATTGGTTCAACAGAATATAAAGCTAAA
CTTGAAGAGACAACTAAAATGGAAATGAAACAAATACGCACCATGTGCGAAATGCTCGAT
TTGGATAAGAAAGGTTCAGCGAGTGAGTTGAGTGCGCGGCTCGTCGGTTTCCTACAGCAG
CCAACTGCGAACTCACCGCACGCGCGCGGCGTCGCCCGCGCCCCCGCCGCCGCCGCGCCC
GCCGCAG
(1027 bp)

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