SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMSG_c25558_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		topoisomerase_1B_[Danaus_plexippus_plexippus]
Ontology
GO:0002168 P instar larval development
GO:0003677 F DNA binding
GO:0003916 F DNA topoisomerase activity
GO:0003917 F DNA topoisomerase type I (single strand cut, ATP-independent) activity
GO:0003918 F DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
GO:0005634 C nucleus
GO:0005665 C RNA polymerase II, core complex
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0005703 C polytene chromosome puff
GO:0005719 C euchromatin
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005875 C microtubule associated complex
GO:0006260 P DNA replication
GO:0006265 P DNA topological change
GO:0006338 P chromatin remodeling
GO:0007059 P chromosome segregation
GO:0007275 P multicellular organism development
GO:0008283 P cell population proliferation
GO:0016853 F isomerase activity
GO:0030261 P chromosome condensation
GO:0031298 C replication fork protection complex
GO:0045995 P regulation of embryonic development
GO:0048477 P oogenesis
Transcript
Level		FPKM:29.02 TPM:18.52
ORF EntryO_SariMSG13101_complete:A_SariMSG_c25558_g1_i1
Sequence
(Nucleotide)
TGCGCATTCGTTGCTTCTAGGCACTTATAATTTGAGTTCGCTCAGCAAGCCTCATGTAAT
CTGCTTCAAGCAAACGTTGTGATACGTAAGCAAAATGAGTGTAGAAAATGCGGCCAATGA
AAATGATGGTGAATCAGGGAAGGTAAACGGCAATAAAGGTGAACACGTGAACGGTATTCA
CAACGGCTACAGCAGCTCCGACAAACACAAGTCGAGTCATAAATCGTCCAGTAAAGACAA
ACATCGTGACAGAGACCGTGACCACAAGAGCTCTAAACACAGTAGCTCAAGCAGAGATAA
AGATAAGGACAAACATTCTAGCAGTAAAAACCACAGCAGTTCACACAAATCGTCTAGTAA
AGACAAAGAACATAGCAGTGAGAAGAAAGATCGAGAACACAGTAGCAGGGATAAGGAACA
CAGTGAGAAGGAAAGGCATCGTAGTGATAAAGATAAAAATAGGGAGAAAGATAGAAGTGA
CAAGGACAGAGATAAGCACAAAAATAGTAGTGATGATAAAAAGTCTTCATCCTCTAAAGA
CAAGGACCGAGATAAAGAACATAAAAGTTCAAAAGAAAAGGAACACAAATCAAAGAGCAA
AGACAAAGACCGTCATAGGAGTGATAAGGATAAACAGAAGAGTGACAAAGATAGACACTC
CAGTTCTAAAGAAAAGCACAGCAGTTCTAGTAAAAGCAAAGAGAAAAGTAGTGATGGTAA
ATATGAAAAAATCAAGAATGAACCTCAAGATTCTCAAGTCAAAGAGGAACCCATGCAGAT
AGATGTACCACAATTGAAACAAGAGTCACCAGATGAAAGTGATGATGGATATGGGAGAGC
CAACATGACAGTATCATCTTGCAATAACTCTCTATCACAGTTCAAAGAAGATCCACTTTC
AGAACTACCACCCGATGAAGAGAGTGAAGAAGATACACCATTGACTGAGAGAATATCTGG
AAAACGTCGCATGGTCAGTGAGAGTGAAGAAGATATTCCACTGCTTCAACGCAAGAAATC
AAAGAAAAAAGTGAAGAAAGAAACATTTGATGATGAAGATGATTATGGTGAAGAAGAAGA
AAAGCCAAAAAAGAAAAAGAAGGCAGAAAAAACGAAAGCAACAAAAGTGAAGTCAGAACC
ACATGATGATGGTGAGAGCCCCGCCAAACGTAAGAAAAAACAAGATGATGACCAAGAAGT
ATGGAAATGGTGGGAAGAAGAAAAGAAAGATGATGGAACCAAATGGATGTTTTTGGAACA
CAAAGGGCCGTTATTTGCACCTGCTTATGAACCGTTACCTTCTAATGTGCGTTTTCGCTA
TGATGGTAAAGAGATAAGATTGACTCAAGATTCTGAAGAAGTTGCTGGATTCTATGCACG
AATGTTAGATCACGAATACACAACAAAACCTGTATTCAATAATAACTTCTTCAGCGATTG
GCGTAAAGTGATGTCATCTGAAGAAGCCAAAATTATTAAAGATCTCAGTAAATGTGATTT
CAAGGAAATGCAGGCATATTTTCAAAGTGTATCAGAAAAAAATAAAAATCGTTCAAAAGA
AGAGAAGGCTGCATTGAAAGCTAAAAATGAAGAAATTCAAAAGGAATATGGATTCTGTAC
GATTGATGGACATAAAGAAAAAATTGGTAATTTTAGAATAGAACCTCCTGGTCTATTCAG
AGGCCGAGGGGAACATCCCAAAATGGGGATGTTAAAAAAGCGCGTCATGCCTGAGGATGT
GATGATCAACTGCTCAAAAGGCAGTAAAATACCTAAACCTCCACCAGGACGGAAATGGAA
GGAAGTCCGGCACGATAATACAGTAACATGGTTAGCGTCTTGGACGGAAAATGTTCAGAG
CCAAGCAAAGTATGTCATGTTAAATCCGAGCTCTAAATTAAAAGGTGAAAAAGACTGGCA
GAAATATGAAACTGCTAGAAAACTTCATAAGTGTATTGATAAAATTAGAGAAACATATCG
TTCTGATTGGAAGGCTAAAGAAATGAGAGTACGCCAGAGAGCAGTGGCACTTTATTTTAT
TGATCGTTTGGCCTTGAGAGCAGGAAATGAAAAAGATGATGATCAGGCGGATACTGTGGG
CTGCTGTTCCTTACGTATTGAACACATTGAGCTGCACAAAGAAAAGGATGGCAAGGAGTA
TGTGGTTGTGTTTGATTTCCCTGGTAAAGATTCTATTAGATATTATAATGAGGTGCCAGT
TGAAAAGAGAGTATTCAAGAATCTCGAAATATTCATGGAAAACAAAGCTGGCAGCGATGA
TCTCTTCGACAGATTGAATACGCAAACACTGAATGATCATTTGAAAGAACTAATGGCTGG
TTTAACTGCAAAAGTTTTCCGTACTTACAATGCATCTATTACGTTGCAGAGGCAATTAGA
TGAATTCACAGATCCTGATGCCACTATACCTGAAAAGATTTTGGCCTACAACAGAGCAAA
CCGAGCAGTTGCAGTTCTATGTAACCATCAGCGAGCTGTTCCTAAAGGTCATTCAAAATC
AATGGAAGCACTTAAAGAAAAGATCCAAGCTAAACGGGATCAAGTCGATGAGGCAGAGGA
AGACTACAGACAAGCATCAAAGGCAGCAAAACGTGGTTCTGTCAAAGAGAAACTAGCTTG
TGATAAGAAGCAAAAGGCTTTAGAGCGGCTGCGGGAACAACTCAAGAAACTTGAACTTCA
AGAGACAGATCGTGATGAAAACAAAACTATAGCCCTCAGTACATCTAAGCTCAATTATTT
AGATCCGCGTATCTCGGTTGCCTGGTGTAAAAAGCATGGGGTGCCTCTTGAGAAAATTTA
CAATAAAACACAGCGTGATAAATTCCGTTGGGCAATCGATATGGCCGGCCCTGAATATGT
GTTTTAACGAACTCAAGTTATCACTTATAGCATTAGCTTCTTAAATATAAAGTTAAATTT
AAGGTTATATTTTACACAGAATTGTGTAATTTTATATGTATACATGGGAAATGTTTTATG
GATTTTTATTGACTTTGTTCATGTAACATTGTGTGATGTATTAACATTTCTGTATTATCG
GTACATTTGGACCCAAACCAATCGGATTACCGTTCCTCTCATTATTAGGATCCAAATTAG
GAAGTCTGACTCTTAATTTATTGTTTAGTAGAGAAGTTAATGTCAAAATTGTTTTAGATA
ATTAGATTCTAGTTTTAAATCGGGACTCTTAGTTTATAAACTTGTAAAGATTTGTATTGT
CTTTATGGATTTTTCTGTTTT
(3261 bp)

- SilkBase 1999-2023 -