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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMSG_c25554_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		LOW_QUALITY_PROTEIN:_neuroblastoma-amplified_sequence-like_[Helicoverpa_armigera]
Ontology
GO:0000149 F SNARE binding
GO:0000956 P nuclear-transcribed mRNA catabolic process
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006890 P retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0070939 C Dsl1/NZR complex
GO:2000623 P negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
Transcript
Level		FPKM:3.13 TPM:2.00
ORF EntryO_SariMSG13096_complete:A_SariMSG_c25554_g1_i1
Sequence
(Nucleotide)
GTACTGATAATACTCATGCAGTTGCTGATATAACCTTTATGCCACTTAGGGTTAAAGATA
ACAAATGGAATTGGGAAGTACTTGTTGTGACATATGATGGGAAACTGCGAGGGTATTTAG
TCTCGCAAACAGAAGGATACAAGTTGCACCACACTTTCCACTTTCCGGGAGCAGTTGGTG
CACTCACTTACTGTGCACCTCATTCAACTCTCTATGTTGCTGGTCTACCTAGAGGTGCTG
GGAAGGATCCAACGTCACCATTGAGCGCTGGTATCACAGCTTGGCGTATATTAAACGATG
ACCCATTCTACAAGCTATCTGTGGTTTCCGATCAGCTCGAAGCTCAGCTGGCGAACGAGA
GGTTCCAACTCTACATACCGTTTGTCACTTCAAAGAATATGGCATTCATCGTACAAATGG
AGATATCACCGGATAACAGTAAACTAGTTTGCTTACACTGCAACGGTGACATTTCCGTAT
GGCGACTGCCGCTGTTGAAGGCGGAACAACGTTGGGCTCTGGTCTCTCAGCCAGACCACG
ACCTGCAGAACCCTCTCGTCCAAGACAATAAGCCGGGCAAGAAGGATCCCTCGAAGTACT
GTGCGGCTGATGTCAACTGGTGGACTAATGAGGAAATAATATTATCTAGATTCAGCGGCG
CCGTGTCTGTATGTAGTTTGGAAGATATGATCAACATACTCGGGAAGAAACCTGAATTCT
TTCAAGGTTCACCGCAGGTGACGCGCGCACACGACGGTACGTTTATGATTTTAGAGTGTG
AATCTAATGTGTTGCCAGCGAAAAAATCTCCAAGCGACGAGAGCATGGGTATGGTGAAAA
CGGAGGCGGACGTGGAGGACACGATGCTGGAGGTGACGAAGGAGCTGGTGAGGACGGTGC
TGTTCGCGATCACGGACATTGAGACGTTTCAGCCGAAGCCGAAGCGCATCACGGTCGTGT
CGCGCGTCTACCGGCTGCTCGGCCTCAAGAGCACCACGCCCGCCGAGCTCTTCTCGAGAA
AGATTGAAAGTGGTAACTACGCGGAAGCCTTGGCCCTAGCCGAGACCTTCAACCTGGACA
GCGACCTGGTGTACCAACAGCAGTGGAGAAAGAATCCCGTCTCGACTGACGCTATCCAGA
AATATTTGAGTAAAGTATCGAAAAAGATATGGGCGGTCCACCAGTGTGTGGACAGACTGC
CCGAGACCCTACCGGCTGCCAGGGAGCTGCTGCACTTCGGACTGGATCTCACCAACGAAA
AGATATTAGACGAAATAAACAAAGAGGCTGAACAGAAGATAATAAACCCCGAGGAGATAA
CCCTCGAGCACCTGAACGCTTACACAAGCGAGCTGCTGCGGTGCCGGCACGTCATGCTGT
TCTACAAGGAGAGACTCGCCTTGTACGAGGCAATATTGAAGAGTGAGAAATCCACATACG
TGAAAGATGAATACGATCGGCTCCGGAGCAATAGCATTGGCAACAGCGCCATAGAGATCG
CTAAGGAAGGGCGCATAGAGGCTCTCACTTGTCTCTGGCCGCATATAAAGACGATACCAA
TGCAGCTGACGGTGCTGGAGAAGCTGCCAGAGACTATAAACCCACTGGAGTTCCAACACT
TGCTGCCGTCACCGAAACCGATGCAGTGGTTCGAGGAGAGATCACCGATTAAGATACCGC
CTTTGCGGCATGAGAACGATTGGTGCAGGAAAAGTATATTTAGGTCGATTTGGAGCTCGA
ATTGGTCAGAAGAGAGTACACCAGAGATTGAGATACCAGTAGATATGCCCGGTAGTAGTG
ACGACATAGCCAAATGGTATGAGAAGAGAGCGCGCGAGATAGAAGAACGCAGTGGTTTGG
TCTCGCACGCTCTCACTCTGGTTACCATAGCAACGGTCGGGGGAGGAGTCCAGGGTCTGG
ACAAAATCCTATTCCATCTTCTCACACTCGACACCCTCATCTACGATATCAACGTCGAGG
GCATCACCCTGAAGGAACTCGAGAAAATGACCCTTTTGGAAACCTGCACTCATTTGATGA
AAATGTCGACGCAGGAAACTTTCGTTTCCGACTTGAAGCAATACATGATACCGTTCCTTA
AACGTTACGAGAGGTTGACTTCCGGTAGTGACATTTGTGTCGACGGTTTAACCGATTACT
TGGAAAGCAGGAGCCGTGTAGATCTCTCACCGATACTTTGGGTGTTACAATCGCCGAAGG
AGTTCGAGCTCGACGTAAGAACTCACCTGGACCTGGTGGAGAAGTGTTTATTCGCATACC
CCGACACCGATCAGCTGGATAAGGCTTGTGATCTGCTAAACACAATATTAAGAGAAACAG
ACGGCAGTATGTCCAATAACGAGCTGATGCGTCGCGTGAAGGTGTTGGAGCGCGTGGTGT
CGGCGTGCACGCGGCTCGCGTGGCGCGGGCTACACGTGCCGCCGCACTCGCTGCACGCGC
TGCCCGCCGAGCCCCAGCACGTGCACAAGCTGCTCACCCGCCTCGCCAGGAGTCTCGCCA
ACGGTGAGGAAAAACCAACACACCAGGACTGGGAGAAGCTTCTGAAGGATATCTTAGAGT
TACAGTCCACAGTCTTCGATTGCATCACGAAAGATCAGTGCTATGAAATATACGCATCGT
CGTTATTGACGTCGGGCATGGCGTCCAGCATAAAGCTAGCCTCGGAGGTGTTAACGTGCG
AGGTGAACACTCGCACCGCACCTCACCTGGTCACGTACGCGCGGAGCGTCGACCTCGTCT
TGAACGCCGCTAAGGAGTACTTCAACTCGGCCTCCGCTCTCAGCGACCCCGCACTAGAAC
TAGCCAAATGCTGTTTGAGCTTAATCAAAGACGGGAACCCAGATATACAGCGGGAACTGG
ACCTTATAGCTGCTTTGCAGATATTGAGTGCTTTCAACATACCACTACTGCCTATACAAG
TCCGTCTGTGCGAGGACAACATGTCGCTGATAGAGGAATGCTTGAAGGCGGATCAGAACG
CGTACTTGGCGACCCACAAACTCCTTAAGTTAGCAACCCTGCTGCAAATCTCCGGAGATG
ATGAACGGACCAGGGAGGGTAGAGTGCTGCAGCTGGTGGGGGAGTACGCGCAGATCGGAA
GAG
(3123 bp)

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