SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMSG_c25500_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		non-structural_maintenance_of_chromosomes_element_3_homolog_[Helicoverpa_armigera]
Ontology
GO:0000781 C chromosome, telomeric region
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0016925 P protein sumoylation
GO:0030915 C Smc5-Smc6 complex
GO:0031398 P positive regulation of protein ubiquitination
GO:0040008 P regulation of growth
Transcript
Level		FPKM:6.11 TPM:3.90
ORF EntryO_SariMSG12972_complete:A_SariMSG_c25500_g1_i1
Sequence
(Nucleotide)
TTTATGTTTGTTTTTGAAGTTTTGTAATTTAAATTTTTCGGTACACTGATTCTGTGAAAG
TTACTGAAAGAAATAAGTTTTTATGGTTTTATAATAAAGATTTACTTTTTTCTAAGTCGC
TGTAATTTTGCTTTAAGAATGAGTCAAAGAAGAAATAACAGAACTCTATCATCTGATGAA
AATATAACGCATCTGGAAGATGCTATTACAGAATGTGTACGCTTTATAGTTTGCCGAGAA
GGCAGCAAAATCCCAATTAAACGGGCGGAGATTATAAAACATTTATCAACTAATTGCGAA
ACTCCTACGAATCAAGTGAATAAAGTTATAGTTGAAGCAGATAAAAAACTAAAAAAGGTT
TATGGTTATAAACTGGTTCAAGTAGAAGGTAAGAGTGGAATCCAATACATTGTAGTCCTT
AACAATGAATGTTATTCATCATTACCTTCAACCATTATGGAGTCGCAGCATAGAAAAATA
CTCATTGCAGCTCTCACACACATTTTCATGACGGGGGGATCAGTCAAAGAAGAAGAGATG
TGGAACTTCTTATCACAAGCTGGATTAATTGACGCTAACGATCAAGTGGGCCGAAAGATT
CTAGTTAACACATTTACAAAACAGTTGTATTTAGTATACTCTAAGATTGGAGAGGGAGAT
TTAGCTAGATATGTTTTTGAATGGGGCCAAAGAGCAAAAGATGAGGTGCCAAAAATGTTC
TTATTGAAAAAAATGGCAGAGGCTTTTGATAAAACCCCAGAACACTGGTGTGAGCAGAAC
AAAGAAGCTATATTAAATATTTCTTCATAAAAGCTACTGTATTTAAATTTTGAACTATTT
AGTTTGTAATCATAATGATACGCCGCGTCGCTCTTTGCAGTTCCGGATCTAAGCAGAGGC
AAAACGGACAACCGTTAGCAAAATTTTGCCTTACGTAATACTTGGACGGCCCTATAATAA
TACATAGATTACTATTAACTAAGAAGACTTAAATACAAAAACTATCACACGA
(1012 bp)

- SilkBase 1999-2023 -