SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMSG_c25498_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		box_C/D_snoRNA_protein_1_[Helicoverpa_armigera]
Ontology
GO:0000492 P box C/D snoRNP assembly
GO:0001094 F TFIID-class transcription factor complex binding
GO:0019899 F enzyme binding
GO:0042254 P ribosome biogenesis
GO:0042802 F identical protein binding
GO:0046872 F metal ion binding
GO:0048254 P snoRNA localization
GO:0051117 F ATPase binding
GO:0051259 P protein complex oligomerization
GO:0070062 C extracellular exosome
GO:0070761 C pre-snoRNP complex
Transcript
Level		FPKM:10.49 TPM:6.69
ORF EntryO_SariMSG12971_internal:A_SariMSG_c25498_g1_i1
Sequence
(Nucleotide)
CTGGCTTTCACACATGTAAATTTTATTATTTATCTCGGCTGGTGTTTGTTTTGGTTACTT
TTTCTAGTAAAAATGTCCTCATCAGAGATTCAAGTGTCTGATAATGAATTATCGAGGTTG
GGCGATTGTGAAGTATGTGGTGCAAATAAAGCAATTTACACATGTCCTAAATGTGAAGTG
AAAACTTGTTCATTAAATTGTGTAAGAATACACAAAAATGAATTGGATTGTGATGGTGTT
CGTGATCGCACTAAATTCATCAGGATGAAGGATTTTACTGATACCGACTTACTTAGTGAC
TACAGATTATTAGAGGAATGTGCTCGTTTTGTTTGGGGAGTAAAAAGAGATGAAAAGAAG
AAATTTACTAGGATTGATAAAGATTTGCCTATTCATCTATTCAAATTAAAAATGGCAGCC
CGGAAGAGGGGCACAGTGTTACAATTTTTAGCACAAAATTTTTCTAGGCACAAAGTGAAT
ACAACAAGATATAACTATAAAACAAACATCATAAGCTGGAGAGTGGAGTGGGTGTTTCCC
AATGTTGATACTGAACCCTTGAAGTTCATTGATGAGAAATGTTCTGAACAAGTACCCTTA
TCAGAGTTATTGGATAAATATCTAAACCCAGATATAATGGATTTTGATAAAGCAAAAGCA
CTGGCATTTTACAAATCTGTTGGATTTAGTGGTGTTAAAATTTTACTAAAGGCTGAGAAA
GTAAAGAGTTCAGCAAAAAAATTTTTTGAGCTTGATCCAACAGATTCATTAGCAGAAAAT
CTATCCGGGAAATGTATTGTCGAGTTTCCTATTGTATTTATTGTTTTCAAAGATCATGCT
TATAATTTTGAGATTATAGATCGGAAGAGCG
(871 bp)

- SilkBase 1999-2023 -