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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMSG_c25462_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_cytoplasmic_polyadenylation_element-binding_protein_2_isoform_X1_[Plutella_xylostella]
Ontology
GO:0000166 F nucleotide binding
GO:0000900 F translation repressor activity, mRNA regulatory element binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006412 P translation
GO:0007141 P male meiosis I
GO:0007283 P spermatogenesis
GO:0007288 P sperm axoneme assembly
GO:0007291 P sperm individualization
GO:0007616 P long-term memory
GO:0008049 P male courtship behavior
GO:0008135 F translation factor activity, RNA binding
GO:0008356 P asymmetric cell division
GO:0017148 P negative regulation of translation
GO:0043022 F ribosome binding
GO:0043679 C axon terminus
GO:0044292 C dendrite terminus
GO:0044297 C cell body
GO:0045202 C synapse
GO:0048471 C perinuclear region of cytoplasm
GO:1990124 C messenger ribonucleoprotein complex
GO:2000766 P negative regulation of cytoplasmic translation
Transcript
Level		FPKM:5.55 TPM:3.54
ORF EntryO_SariMSG12926_5prime_partial:A_SariMSG_c25462_g1_i2
Sequence
(Nucleotide)
CGTGTGCTCTTCCGATCTGGCTGTCCGCTCGATCGGACGTGCGGCCGATGGGCGAACTAC
AATACCCGGGCGCCCCGAGCGTTACTGACGACGAGAGACAATACAGGGCGCCTTTCAGAC
GCGCCCCACAGTACAGGTGGCCGACGCCGCAGCCCCCACAGCCGTCCGCGTTCGCACCGT
GGCGCAGGGCTCCAGCACCGCCCCGACCACCTGACTACAGGCGGAGCGCTTCGTACTCCG
GAAAACCTGACGACAACTATCAGGACAGAAGCGGTTTGGACAACATGAGGTCATTGGAGC
ACTATCTCACAGATATCATGAGAGCTGATACGTCCGATCACATGAAAGGCAAGTCGCCGT
TCTTCCCAGGCGTGGAGGAGGCTGCGGTGGCTGCAAGCGCTGCTGGAGCTGGCTCGCCTC
CGGTGCCGGCTGACCAGGCCCAGGATGTCGTCTCCAGGTTGAGCGCTGCAGTTTCAGGTC
TGTCGATGTGCGTGAGCGCGTTGGGATCGCCGGCCAGGTCGTCGCCGGTGTCGGCCGGCT
CGGAGCACGGCGAACGGTTCAGCCGGAAGGTGTTTGTCGGCGGTCTGCCGCCGGACATCG
ACGAGGATGAGATTACGTCTTCGTTTCGTCGTTTCGGACCTCTCGTCGTCGACTGGCCTC
ACAAAGCCGAAAGCAAAAGCTATTTTCCGCCCAAGGGTTATGCATTTTTACTCTTTCAGG
ATGAGAGTTCAGTGGCCGCGCTGATGGAAGCTTGCATCACCGACGATGATAAGCTATACT
TGTGCGTGTCGTCGCCGACTATACGCGACAAGCCGGTGCAGATTCGGCCGTGGCGTCTCG
CCGACGCCGACTTTGTACTGGACGCGAGTATGCCTCTAGATCCGCGGAAGACTGTCTTTG
TGGGGGGAGTGCCGCGTCCGCTGAAGGCTCTTGAGCTCGCTATGATAATGGACCGGCTTT
ACGGCGGCGTCTGTTACGCTGGCATCGATACCGACCCTGAGCTCAAATACCCAAAGGGCG
CCGGTCGCGTCGCGTTTTCGAACCAGCAGTCTTACATTGCGGCGATATCTGCGCGCTTTG
TCCAGCTCCAGCACGGCGACATCGATAAACGCGTCGAGGTGAAGCCTTACGTGCTGGACG
ATCAGATGTGTGACGAGTGCGCGGGCGCTCGCTGCGGCTCCAAGTTTGCCCCGTTCTTTT
GCGCGAACGTGACCTGCCTCCAGTATTACTGCGAGCACTGTTGGGCGACGATCCACTCGA
GGCCCGGGCGCGAGTTCCACAAGCCCCTGGTGAAGGAGGGCGCCGACAGACCTCGCGCCG
TGCCCTTCCGCTGGTGTTAGTGTCGACCACACCGCCGCAGCCCCTACCCCCCACCAACAC
CGCCACCACTCACCACCACCACCACTCACCAACACCCACCCTCGCACCGCACCGAGAATC
TTCTTAACCACGAAGATGACGGGACGCGTTGTACGTCTCGAAGTAAATGACTGCGATTTG
GCGTTAACATTTAGCGTTTCCCCCCCGAGTGGAAGCTCGGATATGAAGCTATGTTTCCCC
CCCTACTAGGACCTGTTAATTGTCCACTCGCAGAGGGAAGCCGATCGACGTCTTCTTAAT
AATCTTGAAAATTGGTTGACCAGGTCCCTTAGGCGAATTCTCTTTATGATCGGCAAGTCT
TATATTTGAAAAATCTTGTACCGTTACAAAATGGGGAGAAATGTTATGGTTTTCCCCCTT
TTCGCGGGAATAAGGTAAATCTCACATGAAACGGACTTGCACTTGGGAGCTTTCTTAAAC
GACTCTGATGGAGCACTCCTTCCTTCAGATGACCTTCAGACAGATCGGAAGAG
(1853 bp)

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