SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMSG_c25429_g1_i4
Scaffold_id
NCBI non-redundant
(nr)		rRNA-processing_protein_UTP23_[Danaus_plexippus_plexippus]
Ontology
GO:0000462 P maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0032040 C small-subunit processome
GO:0042254 P ribosome biogenesis
GO:0070181 F small ribosomal subunit rRNA binding
Transcript
Level		FPKM:3.50 TPM:2.23
ORF EntryO_SariMSG12869_3prime_partial:A_SariMSG_c25429_g1_i4
Sequence
(Nucleotide)
CTTCAGGGATAACAGACGCTGTTATGTATATTAGTTTACTAGTGTTTCGATACATTCTTA
ATTAATAAATCGTCATCCCTACTGCCTGCCCTATCCCTATCGGACTAATCGAAGGAATGT
TTCTATTTTCTAATTGTTGTTGTCTGTCGAACGTACAATAATATTCCTGAATCAAAAAAC
AGTAATAGTTCAAGAATGGATAGCAAGTACCGGCGCAACGGTCGTTTGATAGACATAGTT
ACGGAAGAGTGGCGCGCGGATCGACTACCGCATGAAGACATCCAAGTACCCCTCGAAGAA
TTACCTGATCCCGAAGCAGATAGTGCTGACTCACATCTTACATTAAAAGAACAAAGCATG
CGTTGGCAGGAAAACTTTCCGGAATTACCTAGTAGAGAAAATCAACATTAGAGAGCAAAT
ACCAAAATATTTAAATGCACAAGCTAAACTACTTACAACAAGATGTATCATTATAGAAAC
TGAAAAAATTGCTAAAATAGCCCATGGCGCATTAACCATCTTAAAACAATTTGGAATACA
TGAATGTGGCCATAAAGAACCAGTTCCTGGATCAAAATGTATTTTATCTATGATTGGAAA
GAGTAACGATAAACATTATATCTTAGCAACACAAGATCGTGATTTACAAGAGAAACTAAG
ACAGAAATCTGGAGCACCTCTATTATATCTACACAACAAGTCACCAACCCTGGAAAAGCC
GTCACAGGCTAGTTATGAAAAAGTCGGACAAACAATACAATCCAATAATTTTATTTTTAT
TTCTGAAAGTCAAAATGATGCATTAAATAATATGAAAAAAGCTTTAGGTGTGCAAGAAAA
GGTTGAGGAAACAAAAATTGTAATAAAAAAGAAGAAACCTCATAATCCTAATCCATTGTC
TTGTAAAAAGAAAAAAAACAAACCACAGAAACATACTGTTACAAAAGACAATCTCAGGGA
AGCTAGGAAAAAAAAGAAAAAAACGTCGAAATATATAAAAGAGAGATCGGAAGAGCGTC
(1019 bp)

- SilkBase 1999-2023 -