SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMSG_c25395_g1_i3
Scaffold_id
NCBI non-redundant
(nr)		vacuolar_protein_sorting-associated_protein_53_homolog_[Bombyx_mori]
Ontology
GO:0000938 C GARP complex
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0006810 P transport
GO:0010008 C endosome membrane
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0032456 P endocytic recycling
GO:0042147 P retrograde transport, endosome to Golgi
GO:0055037 C recycling endosome
GO:1990745 C EARP complex
Transcript
Level		FPKM:3.70 TPM:2.36
ORF EntryO_SariMSG12800_complete:A_SariMSG_c25395_g1_i3
Sequence
(Nucleotide)
GTTTTTGTGTACTCATATAGTGTCGTCATACAGATATCTTTTTGAATTAAAACTAAAATA
AAAAATGGATTCAAGTGATATTTTAGAGGAAAAGGACAACGGACCTGAAGTCCAGATTAA
CTTCCCAAGTTCTGTTATGAGCCGGATCGAGGAATTAATGGGAGGAACTGAACAATTCGA
CAGCGATGAATTTGATGCAGTGGCTTATATCAACAGAGTATTCCCCACAGAACAATCTCT
CTCTGGAGTTGAAAGTGCAGTAGCCAAATGTGAGTTTCGACTCTCTGGTGTGGAACATGA
TATAAGAAGGCTGGTGAGAGCACAAGCAGAACAGAGGGAAGCTGGACAAATAGCTCTTTT
AGAGGCTCAGCGATGTATGGCTGAGTTGGCTTTGCAGGTGGCAGATATAAACAAGAAAGC
AGAACGTAGCGAGAGCATGGTTCGTGAAATAACATCAGAAATTAAACAGCTTGACTGTGC
AAAGTCAAACCTGACGGCCGCCATCACTGCTCTGAACCACTTCCACATGCTGGTGGGGGG
TGTCGATGCACTCAGGACTATGACCCAGCAACGACAGTACAAGGAGATTGCATTGCCCAT
GCAGGCTATTATGGAGGTTCTGCAGCACTTCGAGTCGTACCGCGACATCCGCGAGCTGAG
CGCTCTCGGGGAGCGAGTGCGCGCGATACGAGCCGAGCTGGCCCAGCAGATCCTGGCCGA
CTTCAAGAACGCTTTCACGGGGGGCGCGAGGGGCGGCCCCCCACATCGTGCGCTCGCGGA
AGCCTGCGGACTCGTCGACATACTGGACCCGAAGGTCAAGCAGGACCTGCTCAACTGGTT
CATCAATATGCAGCTTCAGGAGTACCAACACCTGTTCTCGGCGGAGCAGGAGGTCGCGTG
GCTCTCGCACGTGGAGCGCCGCTACGCCTGGCTCAAGCGGCACCTGCTCGGCTTCGAGGA
CACTCTCGGGAACATATTCCCGCAGCACTGGGCCCTCAGTGAGAACATCGCCAAACGCTT
TTGCAAGGTGACGCGGGAGGAACTGACCGCTATCATGTCCTCCCGGAGGTCTGAGCTCGA
CGTGAAGCTGTTGCTCTACGCGATACAGAACACTTACAACTTCGAGCTCCTGCTGCACAA
GAGGTTTACAGGTACGGATCTACGCGCGGACAACGTTGATATTAATATCAAACAGAACAC
CGAAGCCGATCACAAAGATAAAGGCGATGAGGGCGGAGCGCCTGCGGGCGGGTGCGGAGC
GTCGCCGTGGGCGGGGCTGATAGGCGGATGCTTCGAGCCGTATCTCTCGCTGTACATCAA
CAGCTTGGACTCGAACCTGCGCTCCCTCATAGATCGGTTCGTTCAGGACGCTAAGTCTGC
CAGCGCGATTGATGCGCGCGGGGGTGCCGGTGCTGGCGCGGGAGGGAGTGCGGGTAGCGG
GGAAGGCGCCGTCATATCGAGCTGTGCGGATCTGTTCTTGTTCTACAAGAAGTGCTTGGT
GCAGTGCGCGCGCCTCACCACCGGCGAACCGATGCTCGAGCTCGCTGCAGTCTTCCAGAA
GTACTTGCGCAAGTACGGGCACAGCGTCCTGCAGGGGTCGCTCCCTACGGCGCAGGGCGG
TGGGGGCGAGATCGGAA
(1637 bp)

- SilkBase 1999-2023 -