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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMSG_c25380_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_splicing_factor_3B_subunit_6_[Amyelois_transitella]
Ontology
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0001825 P blastocyst formation
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005684 C U2-type spliceosomal complex
GO:0005686 C U2 snRNP
GO:0005689 C U12-type spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0044822 F RNA binding
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:20.11 TPM:12.84
ORF EntryO_SariMSG12773_complete:A_SariMSG_c25380_g1_i1
Sequence
(Nucleotide)
GTTTGACCAGACATCAAATAGTAGTTTAATTAGAGATAAATAATAAAAGTAGTTCGATCA
TGTTAAATTGCTAACTTTTGTAAAATCTTGGCATTGATTTTTAAGGTAAAGTCAAAGCAC
AAAATATAGGTATTGTATTTCCCAATATAAACAAACAATGGCTTTAGCTGTACAAAGACG
AGCCAACGTTCGGCTTCCACCAGAAGTCAACAGAATATTATATGTAAGGAATCTACCATA
TAAAATATCAGCAGAAGAAATGTATGATATTTTTGGAAAATATGGTGCAATTAGGCAAAT
TCGTGTTGGTAATACACCGGAAACTAGAGGAACTGCATTTATTGTATATGAAGATATATT
TGATGCCAAAAATGCTTGTGATCATCTGTCTGGTTTCAATGTATGCAATAGGTATTTAGT
TGTTTTGTACTACAGACCTAATAAGGCATTCAAAGGCATGGATATTGAAAAGAAACAAGA
AGAATTAGATACTTTGAAAAAGAAATATGGAATATCCTCTGAAGATCTTCGTAAATAAAT
TTATTGACTTTGTGAAAAAAAAAAAA
(566 bp)

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