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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMSG_c25312_g1_i3
Scaffold_id
NCBI non-redundant
(nr)		superkiller_viralicidic_activity_2-like_2_[Helicoverpa_armigera]
Ontology
GO:0000166 F nucleotide binding
GO:0000178 C exosome (RNase complex)
GO:0000398 P mRNA splicing, via spliceosome
GO:0000460 P maturation of 5.8S rRNA
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003724 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0006397 P mRNA processing
GO:0006401 P RNA catabolic process
GO:0008380 P RNA splicing
GO:0016787 F hydrolase activity
GO:0044822 F RNA binding
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:13.95 TPM:8.90
ORF EntryO_SariMSG12656_complete:A_SariMSG_c25312_g1_i3
Sequence
(Nucleotide)
GTCTAGTACAAGGAACATAACACTCTGCAGCACAGAACAATATTACTCCTACCGCTCTGC
AGTCTAGTGTGTTCGAGTTGGTTCTTGTGTACATGTAAATAATTTAAAAAAATGGCTAAT
GTCAATAATTTATTCGATTGCTTCGATGATCCGATTCAAAATGATGCCTCTATTTCTCTT
CCTTCTATTTTGACTAACTCGGATAAAGCTGACTCAAGTGAGCAAATCGTAAGTAAAAAT
AACAAAAGGTTCTATGAAGAAGTCGAGTACGCAGATACTTCAGTATCTAAGAAAATTAAG
GAAGATGATGATGATGTGACTGATTTAATTGGTGATTTAAATTTGGAGTTGTTACAGTCC
CGTATTGTCATACACACTTTAGAAACCCATGAAGGTTGTACACATGAAGTTGCAGTACCA
CCAAATCATGAGTATAAGCCACTTGTTTCCAACACAACTGAACCAGCTAAACAGTATAGT
TTCATACTGGATCCGTTTCAGAAAGAAGCCATTATGTGTATTGACAATCTTCAATCTGTT
TTAGTTTCGGCTCACACTTCAGCAGGAAAAACTGTTGTCGCTGAGTATGCTATAGCATTG
TCTCTTAAAAAAAAGCAAAGGGTAATATATACAACACCTATAAAAGCCTTGTCGAACCAG
AAGTACAGGGAGTTTTCAGAAGAGTTTCATGATGTTGGTCTTATCACTGGTGATGTGACT
ATAAACCCATCAGCGTCATGCTTGATCATGACCACTGAAATTTTAAGAAACATGTTATAT
AGAGGTTCAGAAATTATGCGTGAAGTTGGATGGGTTGTATTCGATGAGATTCATTACATG
AGAGATAAAGAAAGAGGTGTTGTGTGGGAAGAAACATTAATTTTACTGCCGGATAATGTT
TACTATGTGTTCTTGTCTGCAACAATACCAAATGCAAGACAGTTTGCCGAATGGGTGTGT
CGCCTTCATTCTCAACCATGCCATGTTGTTTACACTGAGTACAGGCCCACACCACTTCAA
CATTACATTTTCCCAGCTGGTGGAGATGGCATACACTTAGTTGTTGATGAATCGGGTAAT
TTTAAAGAAGAGAACTTCAATACGGCGATGGCAGTGCTCAGTAACGCTGGTGAATTAGCT
GCAGGAGACAAGCGCGGCCGGCGCGGGGGACTTCGCGATAAAAACCAAACTAATATATTC
AACATTGTGAAAATGATTATGGAAAGAAATTTCGCACCCGTTATCATATTCAGTTTTAGT
AAGAAAGATTGCGAGCTGTATGCTATGCAGATGGCGAGATTGGACTTTAACACCATCGAG
GAGAAAAAACTAGTAGACGAGGTGTTCAACAATGCGATGGACGTTCTTTCCGAAGAAGAC
CGTAAACTACCACAAGTTGAGAATGTAATACCTTTGCTGAGGAGAGGCATCGGCATACAT
CATGGCGGTCTTCTACCTATATTGAAAGAGACCATTGAAATTTTGTTCGGCCTAGGTCTA
ATTAAGGCGCTCTTTGCGACTGAGACATTTGCTATGGGTTTGAACATGCCTGCGAGGACT
GTTGTTTTTACTAACTGCCAAAAATTCGACGGAAAGGATTTCAGATTTATAACATCAGGC
GAGTATATCCAGATGTCAGGTAGAGCAGGAAGACGAGGTCTTGATGATAAGGGAGTCGTG
ATACTCATGATCGATTCGAAGGTGTCCCCGGCGGTCGTGAAAGGCATGGTGCAGGGGAAA
GCTGATCCCATTAACTCGGCTTTCCATCTCACTTATAATATGGTGCTTAATTTGTTACGA
GTCGAAGAAATCAATCCAGAATACATGATAGAAAGAAGTTTCTTCCAGTTTCAAAATCAA
GCTGCTATTCCGGACCTTATAGAAAAAGTAAAAGGTAAACAGAAGGAGTACAACGCGTTA
ACTATCGAGAAGGAACATTCGATAGCGGCGTACTGCAGCATCAGATCGCAATTAGAGTTA
CTCGGTAATCAGTTCCGTTCGTTCATCACTAAACCGGAATATCTGAAGCCGTTCCTTCAG
CCGGGAAGACTTGTTAAGTTAAAAACAGAAAAACACGAATACGATTGGGGAATCATAGTG
AACTTCAGGCAGAAAACCAATAAGGGTAAGAAGCAGCAGGAAGAGAACCCACTGACTGCT
GAAACAGTGCTCCTTGTAGATATATTGTTGCACGTTAAAAAAGGGTCGGAGTACGATGGC
GAAGCAAATGTTCCGTGCCCCCCTGGAGAGGTTGGTGACGTGGAAGTAGTACCCGTCCTC
CATACAATCATTTACCAGATCAGTTCTCTCCGTGTCTATTACCCGAAAGACTTGCGACCG
GCGGATAATCGGAAATCCGTACTTAAGACTATTGGTGAGGTGAAAAAACGGTTCCCCGAA
GGACCGCCATTACTGAACCCGATAAAGGACATGAAAATCAACGACCCCGTCTTTAAGGAA
TGCGTGGATAAAATTAAAATACTTGAAGAGAGACTCTACGCACATCAATTGCATAACGAC
AAGAACCGCGGCGCTCTCACCACATCGTACGAGAAGAAACAGGAACTGTACGAAGAGCTG
GTGAGCGTGAAGGGGGAACTGAAGTTTGCGAAGAGTGTGCTCCAGATGGACGAGCTGAGG
AAGCGGAAGCGGGTGCTGCGCCGGCTCGGGTACTGCACCGCGGCCGACGTCATAGAGATG
AAGGGAAGAATAGCCTGTGAATTGAGTAGTGCTGATGAGTTGTTACTAACGGAGTTGATA
TTCAACGGTGTGTTTAACTCGTTGAGTTCTGAACAAAGCGCAGCTCTAGTCAGCTGTTTC
GTGTGTGATGAGAACTCGACGCAGGCGAGCGCCACCGGGGAGGAACTCAGGGGTGTGCTC
AGACAATTGCAGGAATATGCCCGGAGGATAGCTAAAGTGTCTATTGACGCTAAAATGGAT
TTGGACGAAGACGAGTACGTCGGGAAATTCAAATGCACCCTTATGGACGTCGTCCTCGCG
TGGGCAAAGGGCGCCAACTTTCTACAGATTTGCAAAATGACTGATGTCTTTGAAGGTTCC
ATTATAAGATGTATGCGACGTCTCGAAGAAGTGTTAAGACAACTGTGTCAAGCGGCAAAG
AACATTGGCAATACAGATCTTGAAAACAAATTTAGTGACGCTATCAAATTATTGAAGAGA
GACATTGTGTTCGCGGCTAGCTTGTATATGTAAAATTTAAGAAAATATTTTAGAAAAAAA
CATACCTAATTGACGGTATTTTAATTGACATGATATGTTTTACAACATAAGTTTAATAAA
CATTTAAAAAGTATG
(3315 bp)

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