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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMSG_c25312_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		superkiller_viralicidic_activity_2-like_2_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000178 C exosome (RNase complex)
GO:0000398 P mRNA splicing, via spliceosome
GO:0000460 P maturation of 5.8S rRNA
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003724 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0006397 P mRNA processing
GO:0006401 P RNA catabolic process
GO:0008380 P RNA splicing
GO:0016787 F hydrolase activity
GO:0044822 F RNA binding
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:4.48 TPM:2.86
ORF EntryO_SariMSG12652_complete:A_SariMSG_c25312_g1_i1
Sequence
(Nucleotide)
AGATCGGAAGAGCGTCGTCGGGGGACTTCGCGATAAAAACCAAACTAATATATTCAACAT
TGTGAAAATGATTATGGAAAGAAATTTCGCACCCGTTATCATATTCAGTTTTAGTAAGAA
AGATTGCGAGCTGTATGCTATGCAGATGGCGAGATTGGACTTTAACACCATCGAGGAGAA
AAAACTAGTAGACGAGGTGTTCAACAATGCGATGGACGTTCTTTCCGAAGAAGACCGTAA
ACTACCACAAGTTGAGAATGTAATACCTTTGCTGAGGAGAGGCATCGGCATACATCATGG
CGGTCTTCTACCTATATTGAAAGAGACCATTGAAATTTTGTTCGGCCTAGGTCTAATTAA
GGCGCTCTTTGCGACTGAGACATTTGCTATGGGTTTGAACATGCCTGCGAGGACTGTTGT
TTTTACTAACTGCCAAAAATTCGACGGAAAGGATTTCAGATTTATAACATCAGGCGAGTA
TATCCAGATGTCAGGTAGAGCAGGAAGACGAGGTCTTGATGATAAGGGAGTCGTGATACT
CATGATCGATTCGAAGGTGTCCCCGGCGGTCGTGAAAGGCATGGTGCAGGGGAAAGCTGA
TCCCATTAACTCGGCTTTCCATCTCACTTATAATATGGTGCTTAATTTGTTACGAGTCGA
AGAAATCAATCCAGAATACATGATAGAAAGAAGTTTCTTCCAGTTTCAAAATCAAGCTGC
TATTCCGGACCTTATAGAAAAAGTAAAAGGTAAACAGAAGGAGTACAACGCGTTAACTAT
CGAGAAGGAACATTCGATAGCGGCGTACTGCAGCATCAGATCGCAATTAGAGTTACTCGG
TAATCAGTTCCGTTCGTTCATCACTAAACCGGAATATCTGAAGCCGTTCCTTCAGCCGGG
AAGACTTGTTAAGTTAAAAACAGAAAAACACGAATACGATTGGGGAATCATAGTGAACTT
CAGGCAGAAAACCAATAAGGGTAAGAAGCAGCAGGAAGAGAACCCACTGACTGCTGAAAC
AGTGCTCCTTGTAGATATATTGTTGCACGTTAAAAAAGGGTCGGAGTACGATGGCGAAGC
AAATGTTCCGTGCCCCCCTGGAGAGGTTGGTGACGTGGAAGTAGTACCCGTCCTCCATAC
AATCATTTACCAGATCAGTTCTCTCCGTGTCTATTACCCGAAAGACTTGCGACCGGCGGA
TAATCGGAAATCCGTACTTAAGACTATTGGTGAGGTGAAAAAACGGTTCCCCGAAGGACC
GCCATTACTGAACCCGATAAAGGACATGAAAATCAACGACCCCGTCTTTAAGGAATGCGT
GGATAAAATTAAAATACTTGAAGAGAGACTCTACGCACATCAATTGCATAACGACAAGAA
CCGCGGCGCTCTCACCACATCGTACGAGAAGAAACAGGAACTGTACGAAGAGCTGGTGAG
CGTGAAGGGGGAACTGAAGTTTGCGAAGAGTGTGCTCCAGATGGACGAGCTGAGGAAGCG
GAAGCGGGTGCTGCGCCGGCTCGGGTACTGCACCGCGGCCGACGTCATAGAGATGAAGGG
AAGAATAGCCTGTGAATTGAGTAGTGCTGATGAGTTGTTACTAACGGAGTTGATATTCAA
CGGTGTGTTTAACTCGTTGAGTTCTGAACAAAGCGCAGCTCTAGTCAGCTGTTTCGTGTG
TGATGAGAACTCGACGCAGGCGAGCGCCACCGGGGAGGAACTCAGGGGTGTGCTCAGACA
ATTGCAGGAATATGCCCGGAGGATAGCTAAAGTGTCTATTGACGCTAAAATGGATTTGGA
CGAAGACGAGTACGTCGGGAAATTCAAATGCACCCTTATGGACGTCGTCCTCGCGTGGGC
AAAGGGCGCCAACTTTCTACAGATTTGCAAAATGACTGATGTCTTTGAAGGTTCCATTAT
AAGATGTATGCGACGTCTCGAAGAAGTGTTAAGACAACTGTGTCAAGCGGCAAAGAACAT
TGGCAATACAGATCTTGAAAACAAATTTAGTGACGCTATCAAATTATTGAAGAGAGACAT
TGTGTTCGCGGCTAGCTTGTATATGTAAAATTTAAGAAAATATTTTAGAAAAAAACATAC
CTAATTGACGGTATTTTAATTGACATGATATGTTTTACAACATAAGTTTAATAAACATTT
AAAAAGTATG
(2170 bp)

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