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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMSG_c25302_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		vrille_[Antheraea_pernyi]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0000979 F RNA polymerase II core promoter sequence-specific DNA binding
GO:0001078 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006955 P immune response
GO:0007623 P circadian rhythm
GO:0010628 P positive regulation of gene expression
GO:0043565 F sequence-specific DNA binding
GO:0048511 P rhythmic process
GO:0071353 P cellular response to interleukin-4
Transcript
Level		FPKM:7.12 TPM:4.54
ORF EntryO_SariMSG12630_5prime_partial:A_SariMSG_c25302_g1_i2
Sequence
(Nucleotide)
AAGTGGAGTAACACAACGCCATTGGATATTTCGTCATAACATTGTGATAGTGACAAAATA
TAATTTAATAATATTCGGACGTGATTAGTGGGTGTGAAAGATTTTTTAAATATTTAATAC
TGTAGACAATTATTGTGAACTTGACCATACTGCATTGGTGAATTTTGATATTTTCTGTGG
ATTGTGCCATATTACCCACTATTTGGATAATTCCTAACAAGGAGTGCATAAATACCGCAA
ATATTTTTAACCACATTGAAGACTCGTGCGGACCTATCGCCGTCCGCCGAAACATGGTAG
CAGAGTTTATCTTGAGTCAGCAGCAACTGCTGAATACTGGTGTAGGCGCTAATATCGGCC
CTGCCCCGACGCCGACACGCGCTCCGCCGCCCCCACGCGCTCGTCTCTCCGTATCCCCTC
ATTTCCCGATGGACCAATCTCACATGAACAACGGCAGCCCTGATAACCCAGAGGATTACT
CCTCATTCGACTACAAACGCAAGGAGTTTTTCGGACAACGTAAACAGAGGGAATTCATCC
CTGACAATAAGAAGGACGATGGTTACTGGGACCGCAGGAGGAGAAACAATGAAGCCGCTA
AGCGCTCCCGAGAAAAGAGACGCTTCAACGACATGGTCCTCGAACAACGTGTCGTTGAAC
TGTCCAAAGAGAACCACGTGTTGAAAGCTCAATTGGATGCTATAAAGGAAAAATATGGGA
TATGTGGAGAAAACTTGATAAGCATAGACCAGGTTTTGGCTACACTACCTACTTGTGATC
AGGTCCTATGCGTGACCAAGAGGAGCAAGCTGTCAGGCAACGGCCTGTTCCCGCCGGTTC
CTCCGCCGCCACCACAGGGGCCTCCTGCCTCACCTCCGTCGCCGCCACCCCAGCGCGCTC
CGGAACCCTACCAAGAAAGACTTCCAGTCCCGGAGCCGTACTATCCTCACCCGGCGCACT
ACGAGCCTCCCGGTTCAGTACTCAACCTATCCAGATCTCGCCGTGCACCTTCACCATACG
AACTGTCCTCTCTCTCCGGATCGGGGGACGAGACCGCAGAACCCTACGCACCAGAGAATA
ACTGTCTGCCGCTCAAATTACGCCATAAATCTCACCTCGGTGATAAAGATGTCGCCAGCG
CTCTCCTCTCCCTGCAGCACATAAAACAGGAGCCCGGCCCCAGATCGTCTCCTTCCTGGG
ACGGCGAGGGATCGAGCGACGAGAGAGATTCAGGCATCTCCCTGGGAGTGGAGTACAGGC
CCCAGCCGGACAGGATTCCGGAAGAGGACGATGCCCATTTGAAGGCGGAGCTCGCCCGGC
TCGCGACCGAGGTGGCGACACTGAAGAACATGATGAATCAGAACAAGGCGCGCGGGCACG
AGCACTGAGCGCGCCACTGTCGCGTCCGGAGCTCGCCCCGCGCGTTGCGCCTGATACGCG
CAGCCCCGCCGCAGCGCAGCCGCAGCCCCGCCGCAGCGCAGC
(1482 bp)

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