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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMSG_c25280_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		uncharacterized_protein_LOC110371122_[Helicoverpa_armigera]
Ontology
GO:0000166 F nucleotide binding
GO:0002230 P positive regulation of defense response to virus by host
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006397 P mRNA processing
GO:0006915 P apoptotic process
GO:0006921 P cellular component disassembly involved in execution phase of apoptosis
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
GO:0016887 F ATP hydrolysis activity
GO:0019899 F enzyme binding
GO:0030218 P erythrocyte differentiation
GO:0030263 P apoptotic chromosome condensation
GO:0035145 C exon-exon junction complex
GO:0043065 P positive regulation of apoptotic process
GO:0044822 F RNA binding
GO:0045657 P positive regulation of monocyte differentiation
GO:0048025 P negative regulation of mRNA splicing, via spliceosome
GO:0061574 C ASAP complex
GO:0098779 P positive regulation of mitophagy in response to mitochondrial depolarization
GO:0098792 P xenophagy
Transcript
Level		FPKM:25.07 TPM:16.00
ORF EntryO_SariMSG12592_3prime_partial:A_SariMSG_c25280_g1_i2
Sequence
(Nucleotide)
TTAACAATATGGCTGACTGGCTGTTTGGTTTTGCCACTACAGAATAATTGAATGCGTTCG
GTTTTAGAATTTGTCACATCGTTTAGTTTATAAAAGGTAAAGATGCGTCGTAAAAGCGAA
CGCGTTGTCAACAAGAAATCAAAAGCCTCACCGGAAAAAAATGTTGAAAATCCCAAACGT
ACGAAGACACGCCGTAGGAAGCAAAGTTCTACATCAGATAATGAATCCTGTGAAGAGAAA
AGCCCAGTACGTGAAAGTGGTGTTATTATTGATCCTGAAAAAGACTTACAAGAGACTTCG
AACATAAAAGATAGCCTAGAAGAATCACAAGATCAGGTATGGCAAGTGAAAACCGCTGGA
AGTTCTGGCGATGTTGGAGAGATTCAAAAACTCAAACTTTGTTTGAAACGCCCTTCGTCT
ACTCCGGAGCGTGGTGATAAATCTCCACGAAGTAAAGGTAAGCACTCACGTGCAGCCAGT
TCCAGTGACACACCTAGCGTAGAGTCTGTTGAAGATAAAAGAAAAAAACGTCGTTCCAGA
AAGGCTTCTCATGAAGCTAAAAATGATAAGAGTGACGATTCACAAACTGAACAGCAAAAT
GAAATTGAAACTGTTAAGCCAGTAAGTACTGCTCAAGAGAATAATGAAGTTACTCAAAGT
GGAATGGAACAATCTTCAGAGGCCCCTGTGTCTACAACAAATGAGGAGGATGTTACTGAT
GAGTCGGGACATTCAGGGTCAAATGATGAAAAAAAAGATGTTGTTGCTGATGTTGAATGT
AAATCAGATGCTGATACGACTGTTGTTTCACCAGAAGTTGAAACCATAGTTGTATCTTCA
AACGAAGAAGTTATTTTACCTAATACAGAAGAGTCCAAGGATGAATCTGTTATGATTGAA
AAAAATAGTCCAACTCGCAAAAGAAGCGCATCAGTTGATAAGTCTGAAATACTAGAACTA
CATCCAGATGATACAAAGATAGAAAGTTCTGATAATGAGACAAGTAAACAACAAGAGGAA
GAGAGCAAAGAGGAGTCTGTCACGGATCAACAAATAGAGGTAAGTATAAATCAAGAACAA
AATATCAATAAACAAACAGAGGTGGAAAATAATGAGGACATTAATAAGTCTATTAATGAA
TCTGGTGTTCTAGAGAATGAAAATGTTCAAAAGGAAATGAGACAAATAACAGATTCTGAT
AATGAACATAAAATAGAGAATAATGATGAGCAGAAGGAACCATCTGAAAAGGAGACACAT
CAAAATAAAGAAACTGAGCACTCTCATTCCACAAAACTTACAGAAGAACACATTGTACAA
AATGGTCAAACAGCAACAACAGCTGTGAATAGAAAACGTCGTTGGGGTTCCAGACCAACA
AAACTAACGACACAGAAATCAATTACAATTTCCACTGATGTATTAAAAGATATAATACCA
GATGTTAAACCAGTTGAATTTGAAGAAGTTATCGAAGAAAAGAAACATAGAAGAGTAGAA
GTTCCAGAAAAAGTTGAAAGACCATTATTACCTAAAATTGTTATTGATAATACGGAGAAT
GTGGAATATAAGAGAAAAGAACATGAGAAAGAAGTTAAAGAGAAAGAAATTAAGATTAAA
GAATCTTTAGCTTCCAAGAGAAAAATATCTATTATAAAAGAAAATGACAGCATAATCTCC
AGGCCTCCAAGTCCTCCAAAAAATAAACAATCTTGTATATTATATATAACTAATCTAGTT
AGGCCATTCACATCAATACAATTAAAAAACTTATTACTGAGGACAGGAAGGATAGTTGAG
AATGGTTTTTGGATGGACAAAATCAAATCTAAATGTTTTGTTCAATATGAAAATGAAGAT
CAAGCTGTTGAAACAAGGCATGCATTGCACGGTGTCAAATGGCCAGTTTCAAATCCCAAA
ACATTACAAGTCGACTTCTCCACTCAAGAAGCATTCGACAAAGCAAAATTAAATGTAGAT
GGAGATAATGCTCAAGTTTCAGCTTTGTCTGGAACAGTGGAGGACTGGCTCCGTGAACTA
GACTCTAAGAAAGAAAGAGGTGAAATGGACAAATCATGGGAGCGAAAAGCCGCAATGCGT
GAATGGGATGTTGGAAAAAATGAGAAAGACAAGGAAAAAGACAAGTTAAGACATGATGAA
CGACATTTGGAGAAGAGAAGACATCGCTCAATTGAAAGAAGTCCTGAACCAGCAAAAAAA
TTCAAGAAGAAAGAAGAGGAAGCACCCGCGAAACTACTTGACGATTTGTTTAGGAAGACT
AAAGCCACTCCTTGCATATACTGGCTGCCGCTCTCAGCCGAAACGATTGCGGTGAAGGAG
GAACAGAGACGGCAACACATGGCTGAATACGAGCGACGAATGCAGGAACAACGGCGCACA
CATCGACGTCATTGACACGGTCCGTCCCACGTCATGTACAAATACACTACAATAAGCTCA
CACATTCAATTCCATACACACACACACACACATACATATACTCCATTACACATTGAAATA
ATTTCAATATCATCACACACACACACACACACACACAAATAAAATAAATACCCATTCTCA
TAACATACGACCTCAAAGAAGGTACTAATGCGCTCAATATTGTTTTCTATTACACAAAAA
AAAATGATATAATGGAAATCAGCACCGGAGTATTTGTGCAATGTTAATTTGAAATTGGAA
CACTTAAATTATGTTGTCGTTTGACGACGACACGCTACAGACTAAAAAGGCAATTATTAG
CCGGTTTTAAACATTGTTTAAAATTAGATTTATATTGTAAGATTTAACGGAATTGTTTTT
TTTTTTAGAAGATTTATAAACGCATAAAATGGAATACGCTTTTACTAGCATAATTAAGAG
TGTTATTTATTATAGCGACATCTAGCGAGGAAGGTTTTAAAATTATGATACGAATAGATA
TTGTTAGCTTCTCGTCTTTGAACGATTTTGTCATTTGTCTATGCCTCAATCTTATTTCGT
ACTAGTAATATATTTTAATTAGTATTTATAAATACATGTTTACAACTTACATTAAATGTT
CAATAGACGTTTTTAACTTAAGTCTCAATGAAGCATTTTTATATATTCTGTTATAATCAA
TTTAATAAATAATCAACCGCTTTAAGTAGTGAACGAGCG
(3159 bp)

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