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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMSG_c25280_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC106142992_[Amyelois_transitella]
Ontology
GO:0000166 F nucleotide binding
GO:0002230 P positive regulation of defense response to virus by host
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006397 P mRNA processing
GO:0006915 P apoptotic process
GO:0006921 P cellular component disassembly involved in execution phase of apoptosis
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
GO:0016887 F ATP hydrolysis activity
GO:0019899 F enzyme binding
GO:0030218 P erythrocyte differentiation
GO:0030263 P apoptotic chromosome condensation
GO:0035145 C exon-exon junction complex
GO:0043065 P positive regulation of apoptotic process
GO:0044822 F RNA binding
GO:0045657 P positive regulation of monocyte differentiation
GO:0048025 P negative regulation of mRNA splicing, via spliceosome
GO:0061574 C ASAP complex
GO:0098779 P positive regulation of mitophagy in response to mitochondrial depolarization
GO:0098792 P xenophagy
Transcript
Level		FPKM:2.68 TPM:1.71
ORF EntryO_SariMSG12588_3prime_partial:A_SariMSG_c25280_g1_i1
Sequence
(Nucleotide)
TTAACAATATGGCTGACTGGCTGTTTGGTTTTGCCACTACAGAATAATTGAATGCGTTCG
GTTTTAGAATTTGTCACATCGTTTAGTTTATAAAAGGTAAAGATGCGTCGTAAAAGCGAA
CGCGTTGTCAACAAGAAATCAAAAGCCTCACCGGAAAAAAATGTTGAAAATCCCAAACGT
ACGAAGACACGCCGTAGGAAGCAAAGTTCTACATCAGATAATGAATCCTGTGAAGAGAAA
AGCCCAGTACGTGAAAGTGGTGTTATTATTGATCCTGAAAAAGACTTACAAGAGACTTCG
AACATAAAAGATAGCCTAGAAGAATCACAAGATCAGGTATGGCAAGTGAAAACCGCTGGA
AGTTCTGGCGATGTTGGAGAGATTCAAAAACTCAAACTTTGTTTGAAACGCCCTTCGTCT
ACTCCGGAGCGTGGTGATAAATCTCCACGAAGTAAAGGTAAGCACTCACGTGCAGCCAGT
TCCAGTGACACACCTAGCGTAGAGTCTGTTGAAGATAAAAGAAAAAAACGTCGTTCCAGA
AAGGCTTCTCATGAAGCTAAAAATGATAAGAGTGACGATTCACAAACTGAACAGCAAAAT
GAAATTGAAACTGTTAAGCCAGTAAGTACTGCTCAAGAGAATAATGAAGTTACTCAAAGT
GGAATGGAACAATCTTCAGAGGCCCCTGTGTCTACAACAAATGAGGAGGATGTTACTGAT
GAGTCGGGACATTCAGGGTCAAATGATGAAAAAAAAGATGTTGTTGCTGATGTTGAATGT
AAATCAGATGCTGATACGACTGTTGTTTCACCAGAAGTTGAAACCATAGTTGTATCTTCA
AACGAAGAAGTTATTTTACCTAATACAGAAGAGTCCAAGGATGAATCTGTTATGATTGAA
AAAAATAGTCCAACTCGCAAAAGAAGCGCATCAGTTGATAAGTCTGAAATACTAGAACTA
CATCCAGATGATACAAAGATAGAAAGTTCTGATAATGAGACAAGTAAACAACAAGAGGAA
GAGAGCAAAGAGGAGTCTGTCACGGATCAACAAATAGAGAGAATGAAAATGTTCAAAAGG
AAATGAGACAAATAACAGATTCTGATAATGAACATAAAATAGAGAATAATGATGAGCAGA
AGGAACCATCTGAAAAGGAGACACATCAAAATAAAGAAACTGAGCACTCTCATTCCACAA
AACTTACAGAAGAACACATTGTACAAAATGGTCAAACAGCAACAACAGCTGTGAATAGAA
AACGTCGTTGGGGTTCCAGACCAACAAAACTAACGACACAGAAATCAATTACAATTTCCA
CTGATGTATTAAAAGATATAATACCAGATGTTAAACCAGTTGAATTTGAAGAAGTTATCG
AAGAAAAGAAACATAGAAGAGTAGAAGTTCCAGAAAAAGTTGAAAGACCATTATTACCTA
AAATTGTTATTGATAATACGGAGAATGTGGAATATAAGAGAAAAGAACATGAGAAAGAAG
TTAAAGAGAAAGAAATTAAGATTAAAGAATCTTTAGCTTCCAAGAGAAAAATATCTATTA
TAAAAGAAAATGACAGCATAATCTCCAGGCCTCCAAGTCCTCCAAAAAATAAACAATCTT
GTATATTATATATAACTAATCTAGTTAGGCCATTCACATCAATACAATTAAAAAACTTAT
TACTGAGGACAGGAAGGATAGTTGAGAATGGTTTTTGGATGGACAAAATCAAATCTAAAT
GTTTTGTTCAATATGAAAATGAAGATCAAGCTGTTGAAACAAGGCATGCATTGCACGGTG
TCAAATGGCCAGTTTCAAATCCCAAAACATTACAAGTCGACTTCTCCACTCAAGAAGCAT
TCGACAAAGCAAAATTAAATGTAGATGGAGATAATGCTCAAGTTTCAGCTTTGTCTGGAA
CAGTGGAGGACTGGCTCCGTGAACTAGACTCTAAGAAAGAAAGAGGTGAAATGGACAAAT
CATGGGAGCGAAAAGCCGCAATGCGTGAATGGGATGTTGGAAAAAATGAGAAAGACAAGG
AAAAAGACAAGTTAAGACATGATGAACGACATTTGGAGAAGAGAAGACATCGCTCAATTG
AAAGAAGTCCTGAACCAGCAAAAAAATTCAAGAAGAAAGAAGAGGAAGCACCCGCGAAAC
TACTTGACGATTTGTTTAGGAAGACTAAAGCCACTCCTTGCATATACTGGCTGCCGCTCT
CAGCCGAAACGATTGCGGTGAAGGAGGAACAGAGACGGCAACACATGGCTGAATACGAGC
GACGAATGCAGGAACAACGGCGCACACATCGACGTCATTGACACGGTCCGTCCCACGTCA
TGTACAAATACACTACAATAAGCTCACACATTCAATTCCATACACACACACACACACATA
CATATACTCCATTACACATTGAAATAATTTCAATATCATCACACACACACACACACACAC
ACAAATAAAATAAATACCCATTCTCATAACATACGACCTCAAAGAAGGTACTAATGCGCT
CAATATTGTTTTCTATTACACAAAAAAAAATGATATAATGGAAATCAGCACCGGAGTATT
TGTGCAATGTTAATTTGAAATTGGAACACTTAAATTATGTTGTCGTTTGACGACGACACG
CTACAGACTAAAAAGGCAATTATTAGCCGGTTTTAAACATTGTTTAAAATTAGATTTATA
TTGTAAGATTTAACGGAATTGTTTTTTTTTTTAGAAGATTTATAAACGCATAAAATGGAA
TACGCTTTTACTAGCATAATTAAGAGTGTTATTTATTATAGCGACATCTAGCGAGGAAGG
TTTTAAAATTATGATACGAATAGATATTGTTAGCTTCTCGTCTTTGAACGATTTTGTCAT
TTGTCTATGCCTCAATCTTATTTCGTACTAGTAATATATTTTAATTAGTATTTATAAATA
CATGTTTACAACTTACATTAAATGTTCAATAGACGTTTTTAACTTAAGTCTCAATGAAGC
ATTTTTATATATTCTGTTATAATCAATTTAATAAATAATCAACCGCTTTAAGTAGTGAAC
GAGCG
(3065 bp)

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