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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMSG_c25239_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		geranylgeranyl_pyrophosphate_synthase_isoform_X1_[Bombyx_mori]
Ontology
GO:0004161 F dimethylallyltranstransferase activity
GO:0004311 F farnesyltranstransferase activity
GO:0004337 F geranyltranstransferase activity
GO:0005737 C cytoplasm
GO:0006720 P isoprenoid metabolic process
GO:0008299 P isoprenoid biosynthetic process
GO:0016740 F transferase activity
GO:0033384 P geranyl diphosphate biosynthetic process
GO:0033386 P geranylgeranyl diphosphate biosynthetic process
GO:0045337 P farnesyl diphosphate biosynthetic process
GO:0046872 F metal ion binding
Transcript
Level		FPKM:0.93 TPM:0.60
ORF EntryO_SariMSG12513_5prime_partial:A_SariMSG_c25239_g1_i1
Sequence
(Nucleotide)
CAACTCTAGCTTACTGAGTGTGTTCGTCCCTAAGGGCAGCGAGTGCAGTCGTGCCCGGAT
CGATGATATTCAAGATAACAGCATTCTGAGACGGGGAATCCCGGTGGCCCATTCGATTTA
TGGGGTCGCTAGCACAATCAACGCTGCTAATTATGCGATGATAATCGCCCTACAGAAAAC
TTTGGAATTAGGGCATCCTATGGCTATAACAGTATGCACTGAACAGCTTTTAGAACTGCA
TCGAGGTCAGGGTATGGAGATATATTGGCGTGACAATTTCCAATGTCCCTCCGAAGAAGA
ATACAAGGATATGACAATCAAAAAGACCGGTGGCCTGTTCATGCTAGCCATACGTTTGAT
GCAATTATTTAGTGAAAACAAATCGGACTTCAGCAAAATAACCGCCATCCTCGGACTGTA
CTTTCAAATCAGAGACGACTACTGCAACCTCACTGAGAAAGAGTACACTGAAAACAAGAG
TTACTGTGAAGATCTTACAGAGGGTAAATTCAGTTTCCTAATCATACACGCCATCAGGAA
TCAAGAGGGAGACAACCAAGTGCTTCACATATTAAGGCAGAGGACTCGTGACGTTGAAGT
GAAGCGATACTGCGTCACATTGCTGGAGAAACTTGGCAGTTTTCAATATACACGACAGAT
ATTGCAAGCACTCGACCAGGAGGCCAGGAATGAGATTATAAGATTGGGAGGTAACCCACT
TTTAGAAGCTCTTTTGGACGATCTCCTGACTTGGCGCATCGAGGGAAAGGATTCCGTAGT
TGAGACAAACCACGTTTAGGCATTAAGACAATAAAATATTAATAAAATGTACATCTCTCA
GATCGGAAGAGCGTCGT
(857 bp)

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