SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMSG_c25210_g1_i6
Scaffold_id
NCBI non-redundant
(nr)		telomere-associated_protein_RIF1-like_[Helicoverpa_armigera]
Ontology
GO:0000781 C chromosome, telomeric region
GO:0001939 C female pronucleus
GO:0001940 C male pronucleus
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0006303 P double-strand break repair via nonhomologous end joining
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0019827 P stem cell population maintenance
GO:2001034 P positive regulation of double-strand break repair via nonhomologous end joining
Transcript
Level		FPKM:0.74 TPM:0.47
ORF EntryO_SariMSG12457_internal:A_SariMSG_c25210_g1_i6
Sequence
(Nucleotide)
TGGGCATCTACTGTTGGAATATAAAATACTGTTGTATGACTTACTGCACAAACTGTTAAC
AGTACTACCATCAGAGACAAAATTGTCATTTATGAACTCAATGACGCCTATTTTTTTCTC
AAAAGTTATACCCAGTATTTTGGATGACATATCTTGCATAACTATTGAAAATGACTTACT
CAATTCCTTGGAGACATTGGAAACTATTACAAATGAGCTTGGTGAAATTGATTATTTTGA
AAGTCCAGAATGGATGTCATTTATGGAGAGTATATGTAATACAAAAAAATATCCCCAAAT
GTTGAAAAATCTGTTGGATCAAAATAGTCAATTTTGGCACAGACTATGGATCGTATTTAT
TAAACTGCTCAAAGATCAAATAACGAACAACATTATAAATTGCGGGACACCTATTAACTC
GATGTTGCCAATCGTCGAGACCGCATTTAAATTAGACCCTAAGAACAGATGCAGAGCCTT
TCAATGTTGGACCACACTGATAAATATATTTTCCTACGAGACAAACGAGAACTGTATAAA
TAAACGATTAAAATTATTAATTATACCTTTGAAATTAAACAACGCGAAAGTGGAAGAGAC
GGCTGTAGCTAAGTTTAACTCATGGTGGCACTTGATAAATAAATTTCAATTTAAACTGGA
GAAGTTCACTGAGCCGATATTGATATCGTTCCTTCATTTCTGCTTTGGCAAACCCAGTAG
TGGATCCGTGAAGTCTACGTTTATACCGGGTCAGCTTTCAGGTTATCTGAAGGAACAATC
CGTAAAGGCTCTCGTTGAGATTATCGGTCACGTGAACTGTCCCGGTTGCGTTGGACTGGC
TAAGCTGAAGGGGCAAATTATTAACAGTAAAATGTTAAGTAATTACTGGACAGACTGGAC
GTTTTCATTGAAAGTTGCAATACAGTTTTCACTGTGTAATAACGTCAATGAGTTCGTACC
GCAACATGTTCTGTGTCTTCTACAGTCATTTCTTATAACGATGAGCGAATTGCCAGATAA
TAAAATCAAAGATGACATAATGAGTGACTTGTTGCCGATGTTGCTGAAGTTAGTTCAGGA
CGGCAAACAACGCAATAATTATTATGCTGACACAATGCTGGAATTATTACTATCATTTTT
TATAGAAGAAGTTAATATGAAAGATATTCTGAGTGTTAAAGATGAAAAACGGGGTACGCT
GTATAAAATAATTAAATTAACTTTGGATCCTTGTTTGAAGAAATTTTATGAGAGGCACGA
TAAAAGAGAAATAGTGCAAAAATTGAAACCTTTGGCAAATTATATTCTGCGAGACCCTTC
AGGCTTACAATATGTCATGGACAATGTAATAAACAGCCTCCCGACAAATGACATTGCTCT
GACATTTTGGACAACATTAGTGGAATGTATCGGAGAATCATCAGAAAATGATTTCAATTC
GCAGAATCTGCTTAATCTGCTGTTATGGCCTTTGGAATCTTTAAATATGTTTAATGAGGT
AAAATATCCGGAGATCGGAAGAGCG
(1525 bp)

- SilkBase 1999-2023 -