SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMSG_c25104_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		short-chain_specific_acyl-CoA_dehydrogenase_[Agrotis_segetum]
Ontology
GO:0000062 F fatty-acyl-CoA binding
GO:0003995 F acyl-CoA dehydrogenase activity
GO:0004085 F butyryl-CoA dehydrogenase activity
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0008152 P metabolic process
GO:0009055 F electron transfer activity
GO:0016491 F oxidoreductase activity
GO:0016627 F oxidoreductase activity, acting on the CH-CH group of donors
GO:0033539 P fatty acid beta-oxidation using acyl-CoA dehydrogenase
GO:0046359 P butyrate catabolic process
GO:0050660 F flavin adenine dinucleotide binding
GO:0055088 P lipid homeostasis
GO:0055114 P obsolete oxidation-reduction process
Transcript
Level		FPKM:2.63 TPM:1.68
ORF EntryO_SariMSG12285_5prime_partial:A_SariMSG_c25104_g1_i1
Sequence
(Nucleotide)
AGATCGGAAGAGCGTCCTGGACTTGGATTCAAAATAGCTATGATGACATTAGATGCAGGC
AGAATTGGGATTGCTTCACAAGCTTTGGGAATTGCACAGGCATCTTTAGATGTAGCGATA
GATTACGCGTCGAAACGTATAGCATTCGGGAAACCGATCGTGAAACTCCAGTCCATACAG
AACAAGCTTGCTGACATGTCTCTGCAGTTGGAATCTGCACGGCTTCTAACTTGGCGGGCG
GCCTGGCTCAAAGACAATAAGAAGCCATACACGAAAGAAGCAGCGATGGCTAAGTTGGCC
GCTTCAGAAGCTGCCACATTTTTATCTCATCAGTGTATTCAAATACTCGGTGGAATGGGG
TATGTATCAGATATGCCGGCCGAGCGTCATTACCGTGATGCCCGTATCACTGAGATATAT
GAAGGAACATCTGAGATACAAAGATTAGTTATTGCCGGTCAATTAATAAAAGAATATGGA
CTCTAAGTTGTGATGCTATGTTGAAAATCTATGGTCCCATCAACCAAGTTACTAGTTTTC
TGTACAACTGTAAACCTATGGGCATATTTTATTAAGACTCCATAACATAGTAGGAAACGA
TAGTGCGGTTTTATACTGCATTAATTGCCGTTAACATTCAGTGCACTCAAGTTAAAAGTG
GTAAACATATGAACAGTAAATTTGTCCAATAAGTTTATTGTGTAGAATTACCAAATAAAT
ATGGTAATTTTTTGGTAACTTTATTAAGTTGAAGTAAACAGTTTTTTACTTTGTCATTAC
TACTATTAAACATTCAGGAAATTGTCATTCAATAATGCTTATAATTCTAGTCAACTGTTT
GATAAAGGTATTTTTCGTAAATGGTAG
(867 bp)

- SilkBase 1999-2023 -