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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMSG_c25053_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_probable_ATP-dependent_RNA_helicase_DDX46_[Amyelois_transitella]
Ontology
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0008150 P biological_process
GO:0008380 P RNA splicing
GO:0010468 P regulation of gene expression
GO:0010501 P RNA secondary structure unwinding
GO:0015030 C Cajal body
GO:0016020 C membrane
GO:0016607 C nuclear speck
GO:0016787 F hydrolase activity
Transcript
Level		FPKM:19.53 TPM:12.46
ORF EntryO_SariMSG12192_complete:A_SariMSG_c25053_g1_i2
Sequence
(Nucleotide)
TTAAGACGCGTGCCGCAATGGTGTAGTGATTGGTATATAATTATTTTAATTTGATTTTAT
TTAGCGTTATCGAAAATGGTTAGAAGTGGACGAGATCGGGATAGAGATCGTGACCGTGAT
CGTCGACGTTCGCGTAGTCGTTCCGAAACACCAGATCGGAAACGAAGGAGATCGCGATCA
AAGAGTCGTGACAGGACCTCTAAATCGTCTAAAAGAAAACGGAGTCGTAGTAGAGAGAGG
GATTCAAAACGAGATCGTAGCAGAGATAGGGATAGAGACAGGAAAAGTGATAAAAGAGAT
GAGAAGAGAAACAGCTCCAGTAGTAAGTCATCTAGAAAAAAAACACCTGACAAAGAGAAG
GAAAGATCTAAATCTAAGGAAAAGCAAGCCAAAAGTGAAGCAAATGATTATGACATAGGG
TCTACTGATAAGGAGGAAGAACAGAGCCGTTTAGAGGCTGAAATGCAAAAACGAAGGGAT
CGCATTGAGAGGTGGCGCGCAGAACGCAAACGCAAGGAAATAGAATCAGCCAAGAAAGAA
GTGCAAAAAGGCAGCATTGTGACTAGTATACAGTTGCCTATTACTAAGAAATGGTCTCTA
GAGGACGATTCTGGTGATGAAGGTGAAGATGGAGAGTCCAAAGAAAAAAATAACGTGCGT
GAAGATAAGGAAGAAGTAAAGGATGAAATAGATCCCTTGGATGCATATATGCAAGAAGTA
CAACAGGAGGTTCGCAAAGTTAATCAAATGGACCAAGCCAGAGGTATTAGTGTACCGACT
ACTGGTGGCACCGGAATAGTTATCGTTACAGGAACGGCAAAGAAAAAAGTGACTGAACAG
AAAAATAAAGGTGAGCTGATAGAACAAAACCAGGATGGTTTAGAATATTCATCAGAGGAG
GAGACTGAAGATATTAAAGACGCCGCAGCAAATTTAGCATCGAAGCAAAGGAAAGATTTG
GCGAAGGTCGACCACGCCGCTTTACATTATTCAACATTTAGGAAAAACTTTTATACAGAA
GTAAGCGAATTAGCAAGAATGACCCCCGAAGAAGTGGAAGCGTATCGAACTGAACTAGAA
GGTATCCGTGTTAAAGGAAAAGGTTGCCCGAAACCGATAAAATCCTGGGCACACTGCGGT
ATAAGTAAGAAAGAAATGGACATTTTGAAGAAATTAAACTTTGAGAAACCTACACCTATA
CAGGCTCAGGCTATACCCGCTATAATGTCAGGAAGGGACCTAATAGGTATAGCGAAAACA
GGATCAGGTAAGACCCTAGCTTTTATACTTCCAATGTTCCGGCATGTGCTGGATCAACCA
CCATTGGAGGACACAGACGGACCTATATCTCTAATAATGACACCGACTAGGGAACTTTGT
ATGCAAATAGGGAAGGATATAAAGAAATTTGCAAAATCACTCGGATTGAGAGTCGTCTGT
GTGTACGGCGGTACTGGAATTTCGGAACAGATCGCCGAACTGAAACGCGGCGCTGAGATG
ATAGTGTGCACTCCGGGCCGTATGATTGATATGTTAGCCGCTAACTCAGGCCGAGTTACA
AACCTTAGACGCGTTACTTATATCGTCCTAGACGAGGCCGATAGAATGTTCGACATGGGC
TTTGAGCCACAGGTAATGAAGATAATCGACAACATTAGGCCGGACAGACAGACTGTGATG
TTTAGCGCTACGTTCCCGAGACAAATGGAGGCACTGGCCAGACGTATATTACAGAAACCT
ATTGAAATTCAGGTGGGCGGGAGAAGTGTAGTGTGCAAAGAGGTGGAACAGCACGTCGCT
ATACTGGAGGAGGAGGCGAAGTTCTTCAAACTTCTCGAACTCCTGGGCCTTTATAGCGAG
ATGGGGAGCATTATAGTGTTCGTTGATAAGCAAGAGAACGCTGATAGCTTGCTGAAAGAT
CTTATGAAGGCGTCATACTCCTGCATGAGTCTACACGGAGGGATTGATCAATTCGACAGG
GACTCGACGATCGTGGACTTCAAGAACGGGAAGGTGAAGCTGCTGGTCGCGACTAGTGTC
GCGGCGCGCGGACTCGACGTCAAGCAACTCGTGCTTGTTGTCAACTACGACTGCCCGAAC
CACTACGAGGACTATGTCCATCGATGCGGGCGTACGGGTCGAGCGGGGAACAAAGGTTAC
GCGTGGACCTTCCTCACACCCGAACAGGGCCGGTACGCGGGCGACGTGTTACGAGCGTTC
GAGCTGGCCGGCGCGACGCCAACACCCGAACTGCGTAACCTATGGGAGAAATATAAGGAG
GCACAGGAGAAAGAGGGTAAAAAGGTGCACACTGGCGGCGGTTTTAGTGGCAAAGGTTTC
AAATTCGACGAATCAGAAGCTCAGGCGGCGACGGAGAAGAAGAAGTACCAGAAGGCCGCA
CTCGGCTTGCAGGACTCCGACGACGAGGACGTGGAGGGCGACCTCGACCAGCAGATCGAA
ACGATGTTCGCCGCCAAGAAGATTATCAAAGAGATCAAGCCTGGCGTTGCCGTGGGGGGA
GTGCCACCCGCCGGCGGGGCAGCTGTCCCGAGCGGGGCAGCGGGTGGAGCGGATGGCAAG
TTGGAGCTCGCCAGACGGTTGGCATCGCGCATCAATCTGGCCAAAGGGCTTGGCACGGAG
CAGAAGGGCGCGACACAGCAAGCCGCCGAGGCCATTCTCAAAGGAGCTCCCTCGGCGCAT
ACTCTTATTACGGCTAAAACTGTGGCGGAACAACTGGCGGCGAAGTTGAACACGAGATTG
AACTATCAGCCGCGTGACGACGCGTCCAACGAACCGGCCGAGGAGGTGTTCCGGAAGTAC
GAGACCGAACTCGAGATCAACGACTTCCCGCAGCAAGCGCGGTGGAGGGTCACCAGCAAG
GAGGCGTTGGCCTTGATAAGCGAGTACTCGGAAGCCGGCATCACGGTCCGGGGCACTTAC
GTACCGCCCGGGAAGCCGCCGCCCGACGGCGAACGGAAACTCTATTTAGCTATAGAGAGC
TCCCAGGAACTGGCCGTGGCCAAAGCCAAGTCAGAAATCACACGGCTCATAAAGGAAGAA
CTTTTGAAACTACAGACCTCAGCACATCACATGGTCAACAAAGCAAGATATAAAGTTTTA
TAATTTCCCCTATTATTATTATTATGGATTGATAATAAATGTGTATTTTTTTTTTCATTT
TAAAAAAA
(3188 bp)

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