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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMSG_c25002_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		U11/U12_small_nuclear_ribonucleoprotein_48_kDa_protein_isoform_X1_[Bombyx_mori]
Ontology
GO:0000398 P mRNA splicing, via spliceosome
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005689 C U12-type spliceosomal complex
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0046872 F metal ion binding
Transcript
Level		FPKM:1.08 TPM:0.69
ORF EntryO_SariMSG12115_3prime_partial:A_SariMSG_c25002_g1_i2
Sequence
(Nucleotide)
CTATGGGATTGAGTGTACATTTCTGTGTTTTTGTATTGCTGGATTTGAATTATAAATATA
AAAGAAATGGACGAAAGACAAAAGGAACTATCGGATTTAAATACATATATCGAAAGGATC
GATAAGGAGTTGACAAATATACTGGAAAATTTGGAGTGGGACCGGAGATATTTGTTGGAG
AGCAAGAACCTTGAGGTGTGTAAAAATGATCCAAATCACAAGATTCCACCTGCTAAGAAA
GAGGTACATGAAAAAAAGTGTCTTTTAAAAATATATGGCTATATGGATGGTGAAATGCTA
TTACCAGATCTACCAGGGAAGAATAGTATGACCCATGTTAAATTAGGTAAAGAAGAAATT
GCACAGATAATTAATACAGCATCACATAAAGATTCAACCTTTAAAAGAGGGATAGGGCCT
CAGGGTCCAGAACCAATGACATTGGAGAGGCTTCAGTGTGCTTACACTGCGGACGAACGA
CGCGCGATACACGACGCTGTGGTTGCGGCTGCTCCGGCTTGCCATGACCTGTCTGACTTA
GCTTTGTTACGTACAAATGATGAGGATCAGAAAGCACCCAAAGCCAAGTCGAGAATGGAG
GTGTTGGCGGAACTGCGTGATATGAAACGCCGTCGTACGAAGTACCGTGTTGCAGCCAAA
ACGCGTAACTACTCAGACGTACTCCGAGATGTTATTCAAACGCAGATGGAAATATACCAC
AACAAAGAACCACAAAACGATATCGCGTCTAATACAATCATTGTAGATAAAAATAATACG
AGCAATAATAAAACTGACAGTGTTGCTGAAGCATCGTATAAAGAAAAAGAAGAATTTTCT
AGAGATTCACATAGATGTAAATCCAAAGAGCAAGTCAGAGATGCTTCTAGAAGCCGCTAC
AAATATACAGAGCGGCATAGAGATGAAGGCAGATCAAATCAAACTTCTAAAGAAACATAC
AATGATGTTTCTAGAGATGTTTATAATTATGATAGAGTGTGTAAAGACAGTGAAGTGAAA
TATCGTAGTAAAGTCAAAGAGGAATTCAGACAGAGAAGTTATAATGAAAGACGATACAAA
GATGAAAGAGACAGAAGTAGATCCAACTTTAGAAGTGAAGGAGTCGTCAAAAATGAAAAA
CTCTCCAAGTCACCTGAGGATAAGCGATATGGGCATTACAGTAGAGTGAAACCTAGAAAG
AGATCAGAGGAGAAAAAAATTGAAAGTCATCACAGAGTTAGAAACGATTTTTCTGGCTAT
GATGCAAAGACGGCACATGGAGAATCTAGCCACAGAAGATACTATGATGCTTTTGATAAA
GAAGATACGAG
(1331 bp)

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