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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMSG_c25002_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		U11/U12_small_nuclear_ribonucleoprotein_48_kDa_protein_isoform_X1_[Bombyx_mori]
Ontology
GO:0000398 P mRNA splicing, via spliceosome
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005689 C U12-type spliceosomal complex
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0046872 F metal ion binding
Transcript
Level		FPKM:2.24 TPM:1.43
ORF EntryO_SariMSG12114_3prime_partial:A_SariMSG_c25002_g1_i1
Sequence
(Nucleotide)
CCAATATCGTCATAAAACTTACTTTGTCTAACTGAAAGTGAATAAAAATTATTTTAGAAG
AAATGGACGAAAGACAAAAGGAACTATCGGATTTAAATACATATATCGAAAGGATCGATA
AGGAGTTGACAAATATACTGGAAAATTTGGAGTGGGACCGGAGATATTTGTTGGAGAGCA
AGAACCTTGAGGTGTGTAAAAATGATCCAAATCACAAGATTCCACCTGCTAAGAAAGAGG
TACATGAAAAAAAGTGTCTTTTAAAAATATATGGCTATATGGATGGTGAAATGCTATTAC
CAGATCTACCAGGGAAGAATAGTATGACCCATGTTAAATTAGGTAAAGAAGAAATTGCAC
AGATAATTAATACAGCATCACATAAAGATTCAACCTTTAAAAGAGGGATAGGGCCTCAGG
GTCCAGAACCAATGACATTGGAGAGGCTTCAGTGTGCTTACACTGCGGACGAACGACGCG
CGATACACGACGCTGTGGTTGCGGCTGCTCCGGCTTGCCATGACCTGTCTGACTTAGCTT
TGTTACGTACAAATGATGAGGATCAGAAAGCACCCAAAGCCAAGTCGAGAATGGAGGTGT
TGGCGGAACTGCGTGATATGAAACGCCGTCGTACGAAGTACCGTGTTGCAGCCAAAACGC
GTAACTACTCAGACGTACTCCGAGATGTTATTCAAACGCAGATGGAAATATACCACAACA
AAGAACCACAAAACGATATCGCGTCTAATACAATCATTGTAGATAAAAATAATACGAGCA
ATAATAAAACTGACAGTGTTGCTGAAGCATCGTATAAAGAAAAAGAAGAATTTTCTAGAG
ATTCACATAGATGTAAATCCAAAGAGCAAGTCAGAGATGCTTCTAGAAGCCGCTACAAAT
ATACAGAGCGGCATAGAGATGAAGGCAGATCAAATCAAACTTCTAAAGAAACATACAATG
ATGTTTCTAGAGATGTTTATAATTATGATAGAGTGTGTAAAGACAGTGAAGTGAAATATC
GTAGTAAAGTCAAAGAGGAATTCAGACAGAGAAGTTATAATGAAAGACGATACAAAGATG
AAAGAGACAGAAGTAGATCCAACTTTAGAAGTGAAGGAGTCGTCAAAAATGAAAAACTCT
CCAAGTCACCTGAGGATAAGCGATATGGGCATTACAGTAGAGTGAAACCTAGAAAGAGAT
CAGAGGAGAAAAAAATTGAAAGTCATCACAGAGTTAGAAACGATTTTTCTGGCTATGATG
CAAAGACGGCACATGGAGAATCTAGCCACAGAAGATACTATGATGCTTTTGATAAAGAAG
ATACGAG
(1327 bp)

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