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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMSG_c24997_g1_i4
Scaffold_id
NCBI non-redundant
(nr)		SH3_and_multiple_ankyrin_repeat_domains_protein_3_isoform_X5_[Helicoverpa_armigera]
Ontology
GO:0001750 C photoreceptor outer segment
GO:0001917 C photoreceptor inner segment
GO:0005515 F protein binding
GO:0005575 C cellular_component
GO:0005737 C cytoplasm
GO:0005883 C neurofilament
GO:0005886 C plasma membrane
GO:0007416 P synapse assembly
GO:0007612 P learning
GO:0008328 C ionotropic glutamate receptor complex
GO:0014069 C postsynaptic density
GO:0016020 C membrane
GO:0016324 C apical plasma membrane
GO:0017124 F SH3 domain binding
GO:0030054 C cell junction
GO:0030160 F synaptic receptor adaptor activity
GO:0030426 C growth cone
GO:0030534 P adult behavior
GO:0031526 C brush border membrane
GO:0035176 P social behavior
GO:0035255 F ionotropic glutamate receptor binding
GO:0042995 C cell projection
GO:0043005 C neuron projection
GO:0043025 C neuronal cell body
GO:0043197 C dendritic spine
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0060170 C ciliary membrane
GO:0060291 P long-term synaptic potentiation
GO:0060292 P long-term synaptic depression
GO:0071625 P vocalization behavior
Transcript
Level		FPKM:2.07 TPM:1.32
ORF EntryO_SariMSG12107_3prime_partial:A_SariMSG_c24997_g1_i4
Sequence
(Nucleotide)
CCTAGGATAAAGAAATCATACGGCAATATGGAGACTCGTACGGTAGTACTCCATCGCGCA
AGGCGTGGCTTTGGATTCGTGTTGCGCGGTGCGAAGGCATCGTCCCCGCTGATGGAGCTT
CGTCCTTCCGAACGCTGCCCAGCCCTGCAGTACCTCGACGACGTCGACGCCGGCGGTGTA
GCCGACCGCGCCGGCCTCAGAAAGGGGGACTTTCTTGTGGCGATTAACGGTGAGGACGTG
TCTGCGGCCTCGCACGAGCACGTCGTAGAACTGATCCGCAGTTCCGGTGCACTCGTCTCC
ATGACTGTTGTCTCGTTGAACAATGGTAACAACGAACACAACACGTGTACGGTGCCCACG
AGCAAGTCACAGAATCAGTTGTCGAGCAGTACCGGCCGACCTTACGCCGCTACTCTACCC
AGGAAAGCTGCGGGAGGTCGCAGTCCGGCGCCGGCGCCGCCGCGTAGAGATCCCCGCACC
ACTCTGAGTGTAGGACGCGCCAGAGCTAAATCAATGGTGGCCGGCCTGGAGAACGGTGGT
GAAAAGGAAGAGACTTGTGAGCCGCTGAGTATAGCTGGTAAATCCTCATCGGCTGAATCA
GTGCAGTTACATACACCCAGTAATAGCGGTACACCCTCGTCAGGGACTCCGGTGGCGCCG
CGGACAGCCTCGATACGACAGAGGCCGGCCTCGTCTAGGATAACTGCAGCCGAATTGGAA
GAACTGTTTCAAAGGCAAGCTGACGCTGATACATCCGGCGGTAATAACGCAATGATGACG
AGGTCAGCGTTTCAGGAGGGGTCTAGTTCCCCCACGTACTCCCCAGCCCGCGCACCCGGA
AGGGTCTACGCTTCTGTCGCTGAGATGAAGAGATGTCGGGGGAAGTTCTGGAACAAATCG
AGCGCGGGGACACTCCGGCGCGAGTTCCACTCGACCCCGGACCTAGCGGCGGAGCACACG
GCGCACCCGCAGAGAACGCGCTCCAGTGAGGACGTTCACGCAGGTCGCGTTCCGCCCCCC
GCGCACCCGCCGCCGCCACCGCCGCTGCCGGGGTCGGGGTCGGGTGTGTGCGCGGGCGCG
GGAACGGGAGCGCCTGCCTCAACGTTCCGTCCGTCGGAGGGCGCAAAACTGTACGCGTCG
CCGCGGGACCTCGAACCAGTCGGATACCGCTCCACGCACACGAGTCGTAAAGCGATGACG
CTGCGCTCGTGGACGGGACCGACGCGCGCGCAGTCCGCGGACGAGCCGGCCAACCAGTAC
GCGCAGCCATTCAAAAACCATAAGGGTTTCGTTAGACAGAATTCGACTCCAGCGCCGCCG
ATACCTGAGCCGGACTACAGCATGTCCGAGTCGGACGAGGAAGCCGACGCTAAACCCAAG
CCCGAAGCCGCGCCCGTCGCCGAGACCAGCGCCAACAGTAACGCGAGTGGAAGCAGTTCA
GGATCGAGTTCGATGCAGCACTCGTTCTCGGTCGACGAAATACAAAAGATACGGACTCGA
TTGAAGTCGTCGAAATCCTGTGGCGACGAACTGAGTGCGGCCGAGCGGGACGACGGAGAC
AACTCCTCGTCGGGAGTGTCCTCCGACCAGGAGGCACAAGCCAAACCTGCGGCCAGGCGG
GACAAGGTCTCCTTCTGCAGCTCCGTCACCGTGAAGTCCTCCAACGACGTGATCAGCACC
GAGCCCGTACACAGCTCCTCGGAGAGCCTTGCGACGCCGCCGGTGCCGATGCCACAGGGC
ATGCAGCGACACAACTCACTGACG
(1764 bp)

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