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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMSG_c24906_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		probable_ATP-dependent_RNA_helicase_DDX56_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0010501 P RNA secondary structure unwinding
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0042254 P ribosome biogenesis
GO:0044822 F RNA binding
Transcript
Level		FPKM:16.84 TPM:10.75
ORF EntryO_SariMSG11929_5prime_partial:A_SariMSG_c24906_g1_i2
Sequence
(Nucleotide)
CTGTGTTTAAAATCTATGCCACATGTGTCAAAATCAATTCTGTATTGAGTATATAGTGTA
TTCATGTATTGATTTATGCAATTCAGTGATGGCAATTGCCTAAAAAGAAAAGTTTTTACG
AAAATAACAAATTATTGTGACGTGTAGTTTTTAAGAAAAGCTTTCATCCTTTCAAGAATT
ATGCAAATTAAAATATTTTCCTGTAAATTGTACAACTTATAAACGATGGAGGAAAAAAAG
GTTATGTTTCACGAAATGGAGCTGGACGATCGGATATTGAAGGCGATATCCCAATTGGCA
TGGCCAGAGCCAACATTGATCCAAGAAACAGCAATACCATTGCTTCTTGAAGGCAAAGAT
GTTCTCATGCGAGCCAGAACTGGTTCAGGTAAAACTGCTGCTTTCACAATACCAGTAATA
CAGAAAATATTAAATTTGAAGCATACAAGTACACATCAATGTATTAAAGCTTTAATATTA
TCACCCAGCAAGGAATTGTGTGGACAAACTGCTTCTGTTATAGGTGATTTGACATTGAAA
TGCACACGTGAAGTTAGATGTGTAGACATATCTTCAACAGAGACTCAGACCCAGAAGTCT
TTACTGTCTGATAAGCCAGACATTGTTGTTGCTACCCCATCGCGCGCATTGGTACATTTA
AAGGCAAATAATATGAGGTTAAAGGATGATCTAGCTATCTTAGTAGTTGATGAGGCAGAT
TTGGTCTTCTCCTTTGGTTACGAGGCGGAAATCAAGGAATTATTAGGATACTTACCCAAA
ATCTACCAAGCCGTTTTAGCCTCAGCCACACTGTCAGATGATGTCCTGAGTCTCAAGAAA
ATTGTCCTACGTAACCCTGTAACCCTCAAACTGGAAGAACCAGAATTGGCTCCGTCGTCG
CAACTCCAACACTATCACCTCTTTGCAGAAGAAGATGACAAAGCAGCTATATTGTATGCA
TTGTTGAAACTAAACTTAATAAGAGGAAAAAGTATCATATTCGTAAGGACTGTTGACAGA
TGCTATAAGTTAAAATTATATCTAGAACAGTTTAAAATTGGTTCCTGTGTACTTAATTCT
GAACTGCCGGCTGCAGTCAGGTGTTTATCAGTTGATCAGTTCAATAGAGGAAGGTATCAG
ATCATCATAGCCTCTGATGAGAAAGCTCTTGAGAAGCCTGATGGAGGAATTCTGCCTATT
GAAGAGAGAAAGAAAAAGAAAAAGCAAATATCAAAGCGTAAGAGAGACAAAGAGTCGGGA
GTGTCACGCGGTATCGACTTCCAGCATGTGTCTAATGTTATCAACTTTGACTTCCCGCTG
GATGTGAGCTCCTACGTGCACCGAGCTGGCCGCACGGCTCGTGGCAACAATCAGGGTTCG
GTTCTATCATTTGTATCAATACGAGAAAAACCTCTAATGGACGCCGTTGAGGAACATCTG
GCTAAAGGGTTCAACAGTCAAAAAGTTTTACAGAAGTACGAATTTGCGTTAGAAGAAGTG
GAAGGGTTCAGGTACAGGTCCAAGGACGCCTGGCGAGCGGTCACGAGGATCGCGGTGCGG
GAGGCGAGGCTCAAGGAGATCAAGCAGGAGCTTCTCAACTGCAAGAAGCTTCAGGGGTAT
TTTGAAGATAACCCCGCTGACTTGGCCGCTCTGAGACGGGATAAGGCACTCCACACGGTG
AAGGTGCAGCAGCACTTGGCTCACATACCTGAGTACTTGCTGCCGGCGGCGCTGAGGACC
GAGGAACAGCTCGAAGACCAGGACACGGTCCCGGAGAAACCGACAACTAAGAAACGAAAA
CAGTCCGCTAACTACGGTAGCGCGAAGCGACACAAGTATCAAGCGCGTCGCAGTGATCCT
CTGAAGAGTTTCGACGTTGGAAAGAGACCACAGACTGCTGGAGACACGTAGGAGGATGAA
GTATTGCGAGCGCGGGGCAGGGGCAGGGGGCGCTAGCACTCTTGTTACGACTCGGGTCCG
TCTCGCGCATACACGAGAGCTTATAAAAATGGGGCGATCCTCAGTACTCCGCTTGTTTAG
CAAGGGCACCGCCATCATTACAGACGCCGGGCTCCTGTGGACTGCAACATGAACATCTTG
TCG
(2103 bp)

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