SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMSG_c24835_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		nuclear_pore_complex_protein_Nup205_[Helicoverpa_armigera]
Ontology
GO:0000059 P obsolete protein import into nucleus, docking
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005643 C nuclear pore
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006406 P mRNA export from nucleus
GO:0006409 P tRNA export from nucleus
GO:0006810 P transport
GO:0006913 P nucleocytoplasmic transport
GO:0007077 P mitotic nuclear membrane disassembly
GO:0010827 P regulation of glucose transmembrane transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016032 P viral process
GO:0016925 P protein sumoylation
GO:0017056 F structural constituent of nuclear pore
GO:0019083 P viral transcription
GO:0031047 P gene silencing by RNA
GO:0031965 C nuclear membrane
GO:0034399 C nuclear periphery
GO:0044611 C nuclear pore inner ring
GO:0051028 P mRNA transport
GO:0051292 P nuclear pore complex assembly
GO:0075733 P intracellular transport of virus
GO:1900034 P regulation of cellular response to heat
Transcript
Level		FPKM:5.66 TPM:3.61
ORF EntryO_SariMSG11803_complete:A_SariMSG_c24835_g1_i1
Sequence
(Nucleotide)
TAATATTACTCCTACCGGAGATACGAATATTCAAAACAACATTTTCAAGAAATATTCGTC
CTTTAAATTTATTTTATGAGACGGAAGCGTGTATTACATAAATCATTGATAAGAATTTAC
AACTGAAAACATGGATGTAAACGAAGGTACAACTACAGATGACCTATGGACCCCATATAA
AGAGCTCATGTTAGTGGTGGAAGGTTATTTGGCACATGAAGGAGCCGGAGCTCCATACTC
GGTACACACATTTGAATCAGTACTGAGAAGACATAAACAAACTTTTCTCTCTATAATAAA
AAATCCTCCAAAGAATCCAGCAAGTAGAGAAGAGATAAAAAAAGGTATCACAGAAGGTAT
AAATTTGCCCAGCATTGGGAGAACTCTACTATCAAAGGAGTTGGTAGATGAAGCTATTAT
TATATCAGACATGTACAATGTGAGTGAGTATCTCGCATTGGAATTGCTACATACAGCACA
GAGACAGGCGCCGAGACATCCCGGACTACCCCGAGGGCTCATAGCCGTCCTGTTGTACTA
CGATGGGCGTAGGGCGATCGTACACGCACTTAAAGAGCTCTGTATGGCAAGAGAGGGAGT
TTGCTGGTCAATAAGCGGTCGCGAAGAGGTGATAGCGTACGTGTCCCGTTATATAAACCA
GTTAATATCAGACGGGCTGATAGGCAGCGTCCTGGACGCTCTGCGCTCCTTCACGATGCA
GGGGCAGGTGGAGCTGCTCCAGCAGAACCGCGCTCTGCCCCCTCACACGCACTACACCAG
ACTGATGACCACAATTGATAACACGAGAAATTTACTGGCCGGAGTGGTCTTCGCAGCTTC
GGCTCAACGTGGACTCGGTAAAGACATGCTGCTTAGGATATTGTCTGAGCAAACGGCGTC
TCCATCTCAAGGAGCCACCGGCGCTTTGGACGAGGTGTCTCTAGCGCTGCAAATGGCCCT
GCTTTACGCTTTAGACTTATCAGTATTACATAGGTGTTCGAATATATCGATGAAG
(1015 bp)

- SilkBase 1999-2023 -