SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMSG_c24744_g1_i7
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_intraflagellar_transport_protein_122_homolog_[Papilio_xuthus]
Ontology
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005929 C cilium
GO:0007275 P multicellular organism development
GO:0030030 P cell projection organization
GO:0030991 C intraciliary transport particle A
GO:0035721 P intraciliary retrograde transport
GO:0042384 P cilium assembly
GO:0042995 C cell projection
GO:0045879 P negative regulation of smoothened signaling pathway
GO:0061512 P protein localization to cilium
GO:0072372 C cilium
Transcript
Level		FPKM:1.46 TPM:0.93
ORF EntryO_SariMSG11662_5prime_partial:A_SariMSG_c24744_g1_i7
Sequence
(Nucleotide)
CTGTATTTATGTTTAGCAAAACAATCGAAGACTTTACACGCGAATGTATTGGCTAATCAG
ATGCTAGACAAAATCTTAGGACTTCATGTACCACAGAAATTTCAGGAAAGTGTGGAGTTG
CTTATACTGAAGACTCGTGCGAGCGGTACCGGTGATAGTGATGATGAGGTGGCACCGCTT
TGCTGGCGCTGCAGGCGGCACGCTCCTCCGCTGTGTGCAGGGCGATGTCCTCACTGTAGA
CATAAGCTCGTGCATTCTCTCGCTACACACGAGGTACTGCCGTTAGTACAATTCGAACCT
GCGGAGGGGATAGGCCATGAAGAAGCCTTGGAATTAATAGATCGCATGCCGTTACCTGAA
ACAACAGACTTCGAAGCAGCTGGCGACGCTCAAGTATTGACGATTGATAACGACATTGAT
TACACAGACCCCTTCCTTGACAAAATCGACGAGGACGACGAAAGTGGTTTAGTGATTTGC
AGCCGCGCTAGTCTCTTACATTTGAACCCGGCGAGTGTGATTATTGTGAAACGTCCTCAA
TTACGGCCGCTGTACTACAGGAATATGCTTCCAGAACTACCGGCCGCATCATGTCCGCAT
TGTTTCAACCTATTCTACCTAGAGGATTACGAGATCCAGAGGGTGACGAAGGGTCATTGT
ACGTTTTGTCGCCATCCTGCGGATGATGAACGAGCTAACGACAATGACGTAGATGATTCC
CTTCTCAACGATTCGACAGTGTCTACACCTGACAGCGCCATTAATAATCACGACTCTTGG
TGATAGATGTCGCTGTTTCACACTATTGATTTTTAATTTAACACCATTGCTCACAGATGG
CGTTCAATCATGTAAAATGTTCTTATAGGTTCTTTAGCGGTGTCGAGCGGTCCTCGGAGA
CCTTATAGATTTTTGCTTTACCGTCAATGCTGATGTCAGCCGTCAACATGCTACAGTACC
ATTCAACCGAAAGATGTCCACTGGTGGACATAGGTCTCCGTCGTGGAGAATTAAATTAGC
GACTTAAAATTAGCGATTCTTCGGGCAACGCCGGTTACTTCGACTATTTGTTTTCTCATT
CATTCACTTAGTGAAACTCTAAGCACAGCCCTCTCCTTTGCTCTTTAAGCTTTATATTAA
ATCTATTGAAAGTGAGCACGTCTCAGTATCGTATGCCACCGCTGGGCAACATACTAGCCG
(1200 bp)

- SilkBase 1999-2023 -