SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMSG_c24723_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_histone-lysine_N-methyltransferase_SMYD3_[Amyelois_transitella]
Ontology
GO:0000979 F RNA polymerase II core promoter sequence-specific DNA binding
GO:0000993 F RNA polymerase II complex binding
GO:0001162 F RNA polymerase II intronic transcription regulatory region sequence-specific DNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006334 P nucleosome assembly
GO:0006469 P negative regulation of protein kinase activity
GO:0008168 F methyltransferase activity
GO:0014904 P myotube cell development
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0032259 P methylation
GO:0033138 P positive regulation of peptidyl-serine phosphorylation
GO:0034968 P histone lysine methylation
GO:0045184 P establishment of protein localization
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0071549 P cellular response to dexamethasone stimulus
Transcript
Level		FPKM:3.76 TPM:2.40
ORF EntryO_SariMSG11634_complete:A_SariMSG_c24723_g1_i1
Sequence
(Nucleotide)
ACTTTATATTCCATTACATAAAAGTAAAAGCTTAGTAGTAAAAAATGAAGAACATTGTAC
TAAATGCTAATTCAGCAATAAAAGCTGGTGATCTTTTGTTATCAGAACAACCTTTTGCAT
TTGTATTATCATCAAAAGAACAAGGAAATAGATGTGATAATTGTCTACAAAAAATAAAAC
TGTTGAAATGTTCAGGATGTCAGTTTGTTAGTTACTGTGGCCGGACATGTCAAAAGGAAG
CTTGGGCTGACCATAAGTGGGAGTGTGCTAATTTTAAAAGAGTTGCACCCAAAGTTGTTC
CCGATGGGGCACGTATGCTAGCTAAAGTTATCAACCGGTTGAATCGTGGCGACGGTCACT
CTTATAGAGCGTTTTATACGTCGACCTCGTTTAGAATGTGGAAGGATTTAATGTCACATT
ATTCAGATTTAAAAGCGGATAAGAAACGAATGGATCATTTCTCTTCGTTGAGCGTTGTTC
TATACGAATTTTTAAATGATATTTCATTACCTAACGCGGTCGAGCTTATGGGATTGTATG
GACGTATGATTATTAACAGTTTCATGGTCTTGGACATGGATATGAATTCAATAGGCACGG
GCATCTATCTGGCATCGTCGATAGTGGACCATAGTTGTAATCCGAACGCAATTGTGACGT
TCGATGGGAAAACTATAAATATTAGAGCGATCCAGGACATGCCTTCCCTGGACTGGAGTC
AGATACGAATCTCATACATAGACCTAATGAAGACACCGTATGAGAGGCAGACCGAACTCC
TAGAGAGTTATTACTTCTTATGCCAGTGTCCCAGGTGCATGGATGGGATTCAGGCGAAAT
ATGTTTACGCGGCTAAATGTCCAAACGTCGCTTGTGCAAACCCAATTAATATTCCATGGA
AAGAGAACTGCCAAGTAGTTAGAAAACCAGATACCGTAGAAATTAAATCCGAGTGTTCAA
GTGACATAAAAAATGTGCAAAATAGCAAATCGAATTCCAAAATTCCACAAAATAGTGAAC
ATACGAACAAAAATCTACGCAACGGTGAATGTGATGATAATAGAACTAAATATAATGGTG
AAAATAATGAAGGCAGTTTATCCAAAGACGGAGCAGGACATGAAAATATTAATCCAGTTA
GTAACTCAAATGTATTATCAAAGGACACGTCTGAAGATTCAACATGTTGTGAAGTATGTA
AAAGAGAATACACAGAAAAGGATGCAGAAGTGTTTGTTAAAACAATGGAGTTCACACATG
TTCACTTGCAAAGTATGGAAGGTGCTTCAGTGGCTTATGTGGACGTATGTAATTATTGCC
TGGAAAGGCATGAAGGTGTATTACACCCACTGAACGTGATGCACGCACAAACTCTAGATC
ACGCTTTCGATGCCCTTATACAGATGCAACTGTGGGAGAAGGCGTGCCTCTATGCTGAGA
AACTCATTCCATGTTTTAGGTTTTATTATGGTGAAAGGAACCCTTTAGTGGGACTCTTAC
ATATGAAATATGGAAAGATTTTACTGTACAAAATGGATATAGATAAATGTGTCAGTCAGT
TGAAATTAGCCGAGAAAATAATAAGAGTGACACATGGAGTAAGTCATCCTTTATACAGGG
AACATTTGAGATCGGAAGA
(1639 bp)

- SilkBase 1999-2023 -