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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMSG_c24695_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		E3_ubiquitin-protein_ligase_MARCH6_[Papilio_machaon]
Ontology
GO:0004842 F ubiquitin-protein transferase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0008270 F zinc ion binding
GO:0010498 P proteasomal protein catabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0019899 F enzyme binding
GO:0030176 C integral component of endoplasmic reticulum membrane
GO:0031624 F ubiquitin conjugating enzyme binding
GO:0046872 F metal ion binding
GO:0070936 P protein K48-linked ubiquitination
GO:1990381 F ubiquitin-specific protease binding
Transcript
Level		FPKM:0.72 TPM:0.46
ORF EntryO_SariMSG11580_5prime_partial:A_SariMSG_c24695_g1_i2
Sequence
(Nucleotide)
GCAAACTGGAATCCTATGGAATGGGACCGTGCTGCTGCAGAAGAGTTAACCTGGGCCCGT
CTGTTGGGCTTGGATGGTTCCATGGTATTTCTGGAGCATGTCTTCTGGGTTGTATCCCTG
AACACATTGTTTATTATGGTGTTTGCTTTTTGTCCTTACCATATTGGAAGGTTGAGTGTG
GCATTTGCTGGGTTTTCAGGTGAGGGCCCATTTGTTGGTCCATTGACAGCATTAGCTGGT
TATGTGTTGGTTGGTGCTGTTCTTGCAGTTCTTCATGCTATAGCATCCTTTTTGCGTTTA
AGAAGTGCCAAAAAAGCATTAGGATTCTGTTATGTTGTTGTAAAAGTGGCGTTGCTATCA
GTTGTTGAGATTGGCTTAATTCCTCTTGTATGTGGTTGGTGGTTAGACCTATGCTCTTTA
TCAATGTTTGATGCAACCCTAAAGGATAGAGAAGGGAGCTTACAGGCGGCACCTTGGACC
CTCATGTTTATACATTGGCTTGTAGGAATGGTGTATGTCTACTACTTTGCATCATTCATC
CTTCTGTTACGTGAAGTTTTGAGACCAGGAGTACTTTGGTTTTTAAAGAACCTTAATGAC
CCTGATTTTAGTCCTGTTCAGATTTAATAGGAAAGCAAGAAGACATCTTTCTAGCCTTTT
CTCGACACTCGAAAACAAACATAGAATAGCCATAGAGACAGGCA
(704 bp)

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