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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMSG_c24680_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		ribonuclease_H1_[Bombyx_mori]
Ontology
GO:0000287 F magnesium ion binding
GO:0003676 F nucleic acid binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004523 F RNA-DNA hybrid ribonuclease activity
GO:0005737 C cytoplasm
GO:0016787 F hydrolase activity
GO:0043137 P DNA replication, removal of RNA primer
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
Transcript
Level		FPKM:6.71 TPM:4.28
ORF EntryO_SariMSG11558_5prime_partial:A_SariMSG_c24680_g1_i1
Sequence
(Nucleotide)
GCCAGTTTTACAAAACATTTATATCAGCAGAAAAAGTTTACCACAAATATATTGGCTAAT
ATACAAGAAGATGCCTTTCTATGCTGTTGCAAAAGGCCGTACGGTCGGTATTTTTACGAC
ATGGGCCGACTGCGAAGCACAAGTTAAAGGTTTCTCCGGAGCAAGATACAAGAAATTTGA
CACAATAAACAATGCCCAAAGTTTTATCGACAATATAAGCGACACAAAAACTTCGTCGAA
ACTAAAACCCACAAATAATACTTATGATCCTCCTAACACATCAGCTAACCTAAAAAGGCC
CCCAACAAATAATGAAAAAAATATTGTAACTAAGAAAAAAAAGTCTAAGGTAGACCTGGA
AAGTTCGGATGATTTCTCTGATGCTTCTATGGATTCTATAGACCTGAATACAATACTAAA
TAAACAGTTAGATGATGTTGAGAAAAGACTTAAAAGTTTCGAAAAAGGCATCGATAATAT
TATAAAAAAAGCCACAAAGAGTGAACCTAGGACAATATTGATAGATCCACCGCAACCTAA
GAAAATCAGCAACAACAAAAAGTTTGAAATTGATAATGAAGGCTATGTACAAGTTTATAC
AGACGGAGCATGCTCTGCAAATGGCAGAGCCAGTGCAAAGGCTGGTCTAGGTGTTTACTG
GGGAGAGGGACATACTATGAATATAAGTGAACCTGTCATAGGTCGTGCTACAAATAACTG
TGGTGAAATACAAGCTGCCACAAAAGCAATAAAACAAGCATTTGATAATGGAGTTACTAA
ATTATCTATAAACACAGATTCAAAATTCCTAATCAATTCAGTAACTAAATGGATGCCTGC
TTGGAAACGAAAAGGTTGGAAACTCAAATCTGGTGAACCTGTGAAAAATGAAAAGGATTT
TAAAGATTTAGATAGTGTGCAGCATAAACTACAGATCAAATGGAATTATGTGGAAGCTCA
TAGAGGTGTCCATGGCAATGAAATGGCTGACCAGTTAGCAAAGGCAGGAGCATCCCTTTA
TAATAAATAATATTTTGAATTACTATAAGACATAAGCTTTGTGTTGTGATTACCTATATG
ATTCTCAAAAGGAATTAATTCATAAAACTTGTATAGAATTATATAGTAGCGGGACTTGTT
TGAACATCTTTTCCCACAGAGGCTTGTTAGAGATTAAACAATAAAGTTTGTCTTAATCAA
CCACACAAAATTGCGAAATTTCAGATGCCACTGGTATTGTTTTAATTAATTCACTGAGAG
TAAAAGAG
(1268 bp)

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