SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMSG_c24650_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		intron-binding_protein_aquarius_[Helicoverpa_armigera]
Ontology
GO:0000398 P mRNA splicing, via spliceosome
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0006283 P transcription-coupled nucleotide-excision repair
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016020 C membrane
GO:0044822 F RNA binding
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:9.76 TPM:6.23
ORF EntryO_SariMSG11526_internal:A_SariMSG_c24650_g1_i1
Sequence
(Nucleotide)
TCACGAGAATGGTGAGGCTAGGCGTGCCCTACGTGGAGTTGGACGCTCAGGGTCGTGCTA
GACCTAGTATCTGCAATCTGTATCGTTGGCGGTACCTGGCACTGGGTGACCTCGGTCACG
TGACCCGCTTGCCCGAGTACCACGCCGCCAATGCCGGCCTCCGGCACGACTTCCAGCTCA
TCAACGTGGACGACTTCAACGGCGCCGGCGAAACCGAACCCAGCCCATATTTTTATCAGA
ATCTGGCTGAAGCGGAGTATGTGGTTGCCGTTTTCATGTACATGCGACTGCTAGGGTGGC
CTTCGGAACGGATATCGATTCTAACCACTTACAACGGGCAGAAGCATCTCATTCGTGACG
TCATTGATAAACGTTGCGCCGATAACCCACTTATCGGACGCCCTCATAAGGTGACGACAG
TTGACAAGTATCAGGGTCAGCAAAACGACATCGCACTAGTGTCTCTGGTGCGTACAAAAG
CCGTAGGTCACGTGCGTGACCTTCGGCGTCTCATAGTCGCCGCGTCGAGGGCCCGACTTG
GCCTTTATATCTTCGCGAGGGCAAATCTCTTCAGGAATTGCTTTGAACTCCAACCCACCT
TTAACCAGTTGATAGAACGACCGCTGCAATTAGAACTAGTGCCCGGGGAACGGTACCCGG
CGCAAAGGCGAAACGACGCCGCAGTGCCTGAGGCATTGATATTGAGTATAACCGATATGC
CGCATATGGCGCGCTACGTCTACGACCTCTACTTGGAAAAGGTTCGGGATTGCACCAAAC
AGTACGAAAGTTCCCAGAGTTCGTGGTCCGCCCCCGGGTCTGCGAAAGCATCACGTTCGC
AGCAGCCCGACCGGCTAGTACCAACGCATCCTGGTGCTACCGACGGCCAGGACTCTGACG
ATGAAGAGTCCGCCATACCATCAACATCTTCCTTCCAACCAACACACATTGTCAACGAGA
TCGATGAACCGCCGGG
(976 bp)

- SilkBase 1999-2023 -