SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMSG_c24584_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_alanine--tRNA_ligase,_mitochondrial_[Amyelois_transitella]
Ontology
GO:0000049 F tRNA binding
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004813 F alanine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006400 P tRNA modification
GO:0006412 P translation
GO:0006419 P alanyl-tRNA aminoacylation
GO:0016597 F amino acid binding
GO:0016874 F ligase activity
GO:0016876 F aminoacyl-tRNA ligase activity
GO:0019233 P sensory perception of pain
GO:0043039 P tRNA aminoacylation
GO:0046872 F metal ion binding
Transcript
Level		FPKM:4.82 TPM:3.08
ORF EntryO_SariMSG11425_internal:A_SariMSG_c24584_g1_i1
Sequence
(Nucleotide)
ACAAAGGCATAAGACTGCCTTTAAGGAACAATCGTTCAACAAAGGAGTGCTTTTTGATAA
AATCATAGACAGTTTAATCCAAAACGGTATTAAACGGACCAATGATCAATATAAATATAA
TTACGAAAGTGTTGACAATAGAGTTGAGTTTCCATTGTTACGAACGAAATTAGTATCTAT
AGTGAATGAAGACTGTGAATGTATAGATTATCTAGATCCATGCGATAATAAACCATATTA
TCTAGTCACTGAAGATTCAAATTTCTATTGCCAAGAAGGTGGACAGACTGCTGACAATGG
TTTTATAGGGGTCAATGAAAATGTCACTTTCAATGTAGAAAATGCCTTTAAAATACGTGA
CTTTGTGTTTCACAAAGGTTGTTTTAGGTTATCATTGAATGAAAATAATTATGTGAAGTG
TAATAGTGAAGTGATTTTAGAAATTGACAGTGTTAAAAGGTTAAAAGTAATGAAGAATCA
CACGGCGACACATTTATTGAATGCGGCAATAAGGAAAGTGTTGCCAAATAGTGTTGTGTG
TCAGATTGGTTCTAGTGTAACAGAGAAGGGATTATGTTTAAATCTGTCAGTTTATGGGGA
GAAATTGTCACAAAAAGTTATTTTACAAGCACAGGATTTAATCAGGCAATCAATAGTTTC
TAATTGTCCAGTGGAGACTTTAGTCATTGATAATGTGCAGCTATCACGGCAACCACCAGT
ACTGACTGTTCCAGGTGAAGTGTATCCTCAGACTGGCTTGAGACTTGTTACTGCCCAAAC
ACCATTACTCTCCAGGGAGCTGTGTTGCGGGACACACGTACCCTCGACTGGTCTCGTTAA
TGAGTTCTGCATCACGCTAGTGAAAGGCGCCGGAGGGAACACTCCAGTAATACATGCTCT
CACCTGTGATGCAGCTAAACAGGCCCGTGAGCTTTTCTCGAAGGTACATAAACTAGGCGA
TGTCATCGATCTGGTCGACTCGGAGAGGCGGAAGGAGGAACTCTCACAGCTGAGGCACTC
CCTGAGTGAACTGTGCGGCGGTGCCGGCGCTCCCTACGGGGAGTACGCGGAGTGCCTCTC
CTATATCGACTCCTTGCAAAAGAAACCCATCGATAGAAACGATATGGCTTTACATGCGAT
AGCCGAGACGGAAGTACGCGAAGCACTACAGCAAGCGGC
(1179 bp)

- SilkBase 1999-2023 -