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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMSG_c24553_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		nuclear_pore_complex_protein_Nup155_[Helicoverpa_armigera]
Ontology
GO:0000972 P transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005643 C nuclear pore
GO:0005737 C cytoplasm
GO:0006405 P RNA export from nucleus
GO:0006606 P protein import into nucleus
GO:0006810 P transport
GO:0006913 P nucleocytoplasmic transport
GO:0008150 P biological_process
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0017056 F structural constituent of nuclear pore
GO:0031965 C nuclear membrane
GO:0036228 P protein localization to nuclear inner membrane
GO:0044611 C nuclear pore inner ring
GO:0051028 P mRNA transport
Transcript
Level		FPKM:6.16 TPM:3.93
ORF EntryO_SariMSG11397_5prime_partial:A_SariMSG_c24553_g1_i1
Sequence
(Nucleotide)
GTGGTGTGCGTGCGGGGCGCGGGCGCGGCGGGCGGCGGGGACCTGCTGCGCCGTCTCGAG
GAGGCGGCCGAGGTGGCGCGCGTACAGTGCGCAGTGCGTGCCGCCGCAGCCGGGCTGCCT
CAAGCGCTCCAACCGCCCCAGCAGCACATGCAGCGGCTCGACGATGAATTACTCGAAATC
ACTCAGCTCTATGAGGAGTATGCCGACCGTTACAATCTATGGGAATGCAAGTTAGCTATC
ATCCAGTGTTCCGGTCACAATGACGCGTTGCTGGTCGAGAATATTTGGAGTAATATACTG
GCAGAGGCGGAGATGGCTGCCAGGAGCTTGCCCACCGCTGATGATAGACTCACGTCTGTC
CTCAGTAAACTCACTTCACTAGGACGTGAATACGTCAATACGGGACATTGTTTCCCATTA
TATTTTATTGTCCGTCAACTGGAGATAATGAGCTGTAAATTAAACGCGGACAAAAGTATG
GTGTTCAAAGCAATCCTTAATATCGGTGTACCGTTAGAGCAAGTTCTCGATATATATATA
AAGCTGGTGAGCGTGGAACAGCGCGCGTGGCTGTCCGCCGGGTCGGAGACGCACGCGTGC
GCGTGTGCGTCGCGCGCGCTGGAGGTGGCGCGCACGGAGGTGTACGCACTGCCGGCGCAC
ATGCGACGCCGCGCGCTCGCACGCTGCAAGGACCTACACGATGCCGCACTTAACGCGTTA
CAGGCTCGACCCAACACTCAACAACTGATCGACAAATTGTCCGTAGCGCAGGCACATCTA
GACCGTATGGATTGATATAGGTCTATATTCGATTCATACAATATTTATAATATGTTAGTC
ACTTGTAAATGAATTGTAACTATCTTCAGGTCAATCATGTCGGAGTGGTTTTAGCTAGAG
TAGTAGTAAAAGTTAAGGCCAATTACAATATCAGTTTTTTTTATTACTTCACAAAATCCA
TTAAATTTCAAATATGATACTCGTCATTGAAATTTGTTTTTTTTACATACACAAAGTAAA
ATTATTTATATTGGCTCGACGATGTTTCATTAATCAGTCA
(1060 bp)

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