SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMSG_c24514_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		E3_ubiquitin-protein_ligase_TRIM33_[Bombyx_mori]
Ontology
GO:0003677 F DNA binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0017015 P regulation of transforming growth factor beta receptor signaling pathway
GO:0030514 P negative regulation of BMP signaling pathway
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
GO:0070410 F co-SMAD binding
GO:0070412 F R-SMAD binding
Transcript
Level		FPKM:0.35 TPM:0.22
ORF EntryO_SariMSG11359_complete:A_SariMSG_c24514_g1_i2
Sequence
(Nucleotide)
GTGCTCTTCCGATCTTGTAAATTAATTTTAAGTTAGTGTAGTGTTGTTAAAAATAGGTAT
ACATGGCAGAGTCCTTCACGAGACGCATTGAAATGTCCGCATCTCGCAATCTTCGCTATG
TTGACGTGCCTACTTGCAGCTGAGGAGTGAAAGTTCGTGTCCAGAGAAAATGGTGACGAA
GGAAGTAAAATAACACTAAAGGGACACGACAGTGTTGTGAATGGAAAACGTGAATTTTCA
ACCGAGCGGGGAGGACATAGAGCGGGCCCTGATGGACTTGGGGCCGTTGCTCGGCGTCAC
TATTAAAGAGGAGGTGCATGAAGATTTACCCGATGCTAATAGACAGCCATCAGCGCAGCT
CAATGTGGGTAGCTTACCAGATGTCGCAGCAGGCGCTGCGGGCGCCTCCTCTAACCCCGA
AGGCGGTGATGGAATCGAGGGCCATGATAAAGGGTCAGCGGATTCGCTCGCATCACCGAC
AACTGGTCGCGTACCACTATCGAGCGCACGCTGCGTCATGTGCCAAGGAACCCTGGCACA
CACGGACGGTACTCCGAAACTTATGGAGTGCCTGCACTCCGCTTGCGAACCCTGTATCAA
AGCAAAGATAGAAGAGAAGCAAGCTGCCAGTAGCAATTTTTTGGGTACCGACCGGATCAC
AATAACGTGTCCGGTATGCAGACTTCAGTGCCAACCGTCGAACATGATCGACCAACGGTT
CGTCATAGAGAAGCTCGCTGTCGAACAAGTTGGCGCTAATGGTATTAGCGGTGAGCAGCA
GTGCAACAGCTGTGAAGACACAGAATCGGCGACCAGCTACTGCGTCGATTGCGCAGAGTT
TATATGTGAAAATTGCGTGCACGCACATCAGAGGCTAAAAATAACAAAGGACCATACGAT
TAAAACGAAAGAGGAGGCGGTGGCGGAGCTGCAAGCGGCGCAGAACAGTACGCACAATGC
ACACGACATGTACTGCACGGAGCATACGCAGGAACGTCTGACGTTGTTCTGCGAGACGTG
CGACCGGCTCACGTGCCGGGATTGCCAGCTTCAGCATCATAGAGATCACAAGTATCAGTT
TAGCACTGAAATGGCAGCTCATGCTCGTGCGAATATATCGTCGCTGTTGTCTGAAGTGAG
CTACAAGCGAGTGCTGCTCGGCTCCGCCATGAAGGTGATAAGGGACCGGCAGCAGCTCAT
CGCTGATAAGAAGAAAGCGCTCGTACACGAAATCACACAGACCGTTGTCAGCTAGTGTTG
CGCCTGAACGAGGTGTGCGACGCGAAGCAGCGCACGCTGAGCGAGAAGAAGGACGCGCTG
GAGAGATCGGAAGAGCGTCG
(1340 bp)

- SilkBase 1999-2023 -