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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMSG_c24512_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		U3_small_nucleolar_RNA-associated_protein_6_homolog_[Helicoverpa_armigera]
Ontology
GO:0000462 P maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0006396 P RNA processing
GO:0030515 F snoRNA binding
GO:0032040 C small-subunit processome
GO:0034388 C Pwp2p-containing subcomplex of 90S preribosome
Transcript
Level		FPKM:10.01 TPM:6.39
ORF EntryO_SariMSG11354_3prime_partial:A_SariMSG_c24512_g1_i1
Sequence
(Nucleotide)
TTTGAATATCATATCCAACGTTGAGTAAAACAAAAGGAGGATTACGTACAATATATAGCT
TATGAATTAGCTCTACTTGAAAATATTTCTCTTAGGCGGAAACAATCTAAGCTTACTGAG
AAGAAGAAAGAAATTGAATATTCCATAGCTCAACGTCTCAACAAACTGTTTAAACAGTTT
ATATATAGATTTCAAAATGATGTCGAAATTTATTTTGAGTATATTCGATTCTGTAAAAGT
GTTGGATTTGTTCAAGCAGTATCTGGTATTATAGGTCAAATGCTTCAGGTTCATGGTGAC
AAACCAAAGATGTGGCAGTTGGCAAGTAAATGGGAAAGTGTGGAACAGAATAATTTAGAA
AATGCAAGAAATTTCCTATTGAAGGGACTTCAGAGACACCCTGATTCTGAAGTTCTTTAT
TTAGAACTTTTTAATATAGAACTCTTAGCTCTTACATTTAAAGCAGAAACTGATGAAGAA
AAGGAGAAATTATCTAAAAGGGCAGATATTGTGTGGAGGAATGCAGTAAAAAATATAGAC
ACTGTTTCCATCCTATTCAAGTTTTATGATATGTGTTTAAAATATGGTGTGAAGGATACA
TTTTCAGATGAAATTAAACAAGAGATTTGGTCAAAACATGACAATCAGGATGTTTGGTCA
TATATTGCATCAAAGGAATTAGAGGGAC
(688 bp)

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