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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_SariMSG_c24468_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_E3_ubiquitin-protein_ligase_RNF25_[Amyelois_transitella]
Ontology
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005829 C cytosol
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
GO:0051059 F NF-kappaB binding
GO:0051092 P positive regulation of NF-kappaB transcription factor activity
GO:0061630 F ubiquitin protein ligase activity
Transcript
Level		FPKM:2.83 TPM:1.80
ORF EntryO_SariMSG11266_3prime_partial:A_SariMSG_c24468_g1_i2
Sequence
(Nucleotide)
GGATCACCGATGAACTGGAAGCTTTAGAAGCTATTTTGATGGATGATGTTGTTATTAAAA
AAGATGGGAATGTACCAAACATAATTGAAACTGTCGTGCATCCATCAACGGGGCACGACA
TCGCTCAGCAATTCGTCTGTGTGACTCTAGAAGTGAAGTTGACCCCGGGATACCCGGACA
GTAGCCCGGACGTGAACCTGAGAAATCCCAGGGGTCTTGACGATGAAATTCTAACGACCA
TCAATTCACAAATCAAACAAAAATTGGGAGATTGTATTGGGCAGCCAGTTGTGTTTGAAC
TCATTGAGCTAATTCGTGACAGACTCACAGAGAGCAACTTACCAAGTGGAAATTGTGTAA
TTTGCCTCTTTGGGTTCACTAATGGTGATATTTTTATCAAGACACAATGCTACCATCATT
TTCATAACCACTGTCTTGCCAATCATCTAATTGCGGGAGAGAAGTTTCATGCCGAAAAGA
TGGAGAAATTAGCAAAATGGCAGCAAATGCAGGCACCATCTTACCAACAAACATGCCCAG
TGTGCCGCTGTACGCTTACCTGCGATGTAGACTCATTGAAAGAGGCTCCTCCGCCCATAG
AATCTCTGACAGCTGCACCGTTTTGTCTGACTCCAGAATTGAAGGCGATGCAACAGCAGA
TGGCCGCTTTGCTTGCCCAACAAGTGGCCAAGCGGGGCGTCGTCTGCATGGGAGACACAG
GTCCACCGCCGCTCACCATCACATCCCCTTCTGATAACGATAATGAAGCCAACGGATCCA
CGAGCTCAACAACACAGGAGAGCCCCAAGACTGAGAATGCAGAAGGACGGCCTAACGGGA
ACTCATCCAATGATAACACATCGCCTCGTACCAAGAACACCTATCGTGGGCCATACAGGG
GTTTCAATCGTCGCGGCAAGCCGGGCCGGCGGGGTCGAGGTGCGCGGTGACCCGAAAGCC
CCCCGCGCACACAATCGCCCCCCTAGCTGCCCACCCGCTACGCACTTGCCGTATCCCCAG
CCCCTTATTCGTACCCGCTCCTTAACAAACAACGTACAAAGACAACGCAACGAACGCGAA
ACACTAGGCAACATCAACGTC
(1101 bp)

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